Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EES03178 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G26660.1 | EES03178 | AT3G28715.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008206_P001 | Maize | nucleus | 16.39 | 95.89 |
| Zm00001d040527_P001 | Maize | nucleus | 62.06 | 94.31 |
| CDY05331 | Canola | nucleus | 27.17 | 87.88 |
| CDY05516 | Canola | nucleus | 26.93 | 87.12 |
| Os01t0285300-01 | Rice | nucleus | 84.78 | 84.58 |
| OQU77376 | Sorghum | nucleus | 74.94 | 74.42 |
| GSMUA_Achr11P... | Banana | nucleus | 31.62 | 57.94 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.24 | 57.82 |
| CDX93504 | Canola | nucleus | 36.77 | 53.4 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 34.66 | 52.3 |
| CDY50901 | Canola | nucleus | 36.3 | 51.84 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 36.3 | 50.49 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 40.52 | 50.44 |
| Bra030783.1-P | Field mustard | nucleus | 40.75 | 50.43 |
| CDY32188 | Canola | nucleus | 39.58 | 50.3 |
| CDY31082 | Canola | nucleus | 40.75 | 50.29 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 42.62 | 49.86 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 43.09 | 49.73 |
| Bra020016.1-P | Field mustard | nucleus | 38.64 | 49.7 |
| AT1G57560.1 | Thale cress | nucleus | 36.53 | 49.68 |
| CDY06359 | Canola | nucleus | 35.83 | 49.68 |
| CDY22635 | Canola | nucleus | 35.83 | 49.51 |
| Bra031669.1-P | Field mustard | nucleus | 37.0 | 48.32 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 42.39 | 48.27 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 37.7 | 48.2 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 40.28 | 47.78 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 38.41 | 47.67 |
| Bra036588.1-P | Field mustard | nucleus | 37.24 | 47.46 |
| CDY68301 | Canola | nucleus | 37.0 | 47.16 |
| CDX87038 | Canola | nucleus | 37.24 | 47.04 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 39.58 | 46.94 |
| AT1G09540.1 | Thale cress | nucleus | 40.05 | 46.72 |
| AT5G26660.1 | Thale cress | nucleus | 37.7 | 45.74 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 40.52 | 45.41 |
| GSMUA_Achr11P... | Banana | nucleus | 39.58 | 45.07 |
| CDX80576 | Canola | nucleus | 37.24 | 44.54 |
| VIT_14s0060g00240.t01 | Wine grape | nucleus | 45.67 | 44.42 |
| CDX88230 | Canola | nucleus | 37.0 | 44.38 |
| KRG90431 | Soybean | nucleus | 43.56 | 43.46 |
| KRH33726 | Soybean | nucleus | 43.56 | 43.36 |
| PGSC0003DMT400040774 | Potato | nucleus | 40.98 | 43.0 |
| Solyc10g044680.1.1 | Tomato | nucleus | 39.58 | 42.46 |
| KRG96660 | Soybean | nucleus | 42.39 | 41.71 |
| KRH68389 | Soybean | nucleus | 40.75 | 41.63 |
| EES18602 | Sorghum | nucleus | 30.91 | 40.99 |
| PGSC0003DMT400047076 | Potato | nucleus | 40.75 | 40.85 |
| Solyc01g102340.2.1 | Tomato | nucleus | 40.52 | 40.61 |
| Bra009910.1-P | Field mustard | nucleus | 30.68 | 39.7 |
| EER92216 | Sorghum | nucleus | 30.68 | 39.7 |
| EES03490 | Sorghum | nucleus | 29.04 | 39.49 |
| EES03504 | Sorghum | nucleus | 28.34 | 37.93 |
| EER97608 | Sorghum | nucleus | 33.02 | 37.01 |
| EES02393 | Sorghum | nucleus | 24.12 | 36.79 |
| EES03100 | Sorghum | nucleus | 28.81 | 36.07 |
| Bra020526.1-P | Field mustard | nucleus | 35.13 | 34.09 |
| EES07893 | Sorghum | nucleus | 20.14 | 33.99 |
| EES06150 | Sorghum | nucleus | 23.65 | 33.78 |
| OQU86237 | Sorghum | nucleus | 20.84 | 33.09 |
| EES11177 | Sorghum | nucleus | 22.95 | 32.89 |
| EES07547 | Sorghum | nucleus | 21.78 | 30.49 |
| EES13346 | Sorghum | nucleus | 24.82 | 30.03 |
| EER97244 | Sorghum | nucleus | 25.76 | 28.65 |
| EES17106 | Sorghum | nucleus | 25.29 | 25.84 |
| CDY05517 | Canola | plastid | 6.79 | 16.96 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:8078133 | UniProt:C5XHY7 | EnsemblPlants:EES02806 | ProteinID:EES02806 |
| ProteinID:EES02806.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0010119 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF465 | InterPro:SANT/Myb |
| SMART:SM00717 | EnsemblPlantsGene:SORBI_3003G136600 | SUPFAM:SSF46689 | unigene:Sbi.2589 | UniParc:UPI0001A84FE2 | RefSeq:XP_002457686.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:13029387..13031649
Molecular Weight (calculated)
47483.4 Da
IEP (calculated)
6.828
GRAVY (calculated)
-0.686
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSCCYKQ KLRKGLWSPE EDEKLMNHIT KHGHGCWSTV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SQEEEDLIIE LHAVLGNRWS QIATRLPGRT
101: DNEIKNLWNS SIKKKLRQKG IDPNTHKPLA EVEHSKAAPT ISTERTSESS DVDPSSGGAL GNLSHLLSET AQSPELLPVL GKHRKETTSL AHLRVPPKEL
201: FLDQLVSGHE NLTSCRSTGP IPNFPFQQLM CYNNEFGHKN GGSNNSFWFN QNESSGSTIS TVMPPVSPST LSTSTGLNGS PDNPHSGGTG IQNTQFYWET
301: ANPSSSSSRG SSGSNSLGFE RQSTSSLLES SVFPWTDLTP DKNSQVHLEE ELKWPDLLHG TFTDTPATMQ NLSQSLYEDV IKAESQFNIE GLCAAWSQNL
401: QPQQHLQVVS DLYDKDLQRM SLSFENI
101: DNEIKNLWNS SIKKKLRQKG IDPNTHKPLA EVEHSKAAPT ISTERTSESS DVDPSSGGAL GNLSHLLSET AQSPELLPVL GKHRKETTSL AHLRVPPKEL
201: FLDQLVSGHE NLTSCRSTGP IPNFPFQQLM CYNNEFGHKN GGSNNSFWFN QNESSGSTIS TVMPPVSPST LSTSTGLNGS PDNPHSGGTG IQNTQFYWET
301: ANPSSSSSRG SSGSNSLGFE RQSTSSLLES SVFPWTDLTP DKNSQVHLEE ELKWPDLLHG TFTDTPATMQ NLSQSLYEDV IKAESQFNIE GLCAAWSQNL
401: QPQQHLQVVS DLYDKDLQRM SLSFENI
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
Arabidopsis Description
MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.