Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d011238_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G26660.1 | Zm00001d011238_P001 | AT3G28715.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008206_P001 | Maize | nucleus | 24.56 | 94.52 |
| Zm00001d024784_P001 | Maize | nucleus | 60.85 | 66.8 |
| EES02806 | Sorghum | nucleus | 94.31 | 62.06 |
| Zm00001d023931_P001 | Maize | nucleus | 21.0 | 60.82 |
| CDY05331 | Canola | nucleus | 27.4 | 58.33 |
| CDY05516 | Canola | nucleus | 27.4 | 58.33 |
| Os01t0285300-01 | Rice | nucleus | 83.63 | 54.91 |
| Zm00001d010907_P001 | Maize | nucleus | 75.09 | 49.53 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.28 | 42.18 |
| GSMUA_Achr11P... | Banana | nucleus | 34.88 | 42.06 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 49.82 | 38.36 |
| AT1G57560.1 | Thale cress | nucleus | 41.99 | 37.58 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 49.47 | 37.57 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 40.93 | 37.46 |
| CDX93504 | Canola | nucleus | 38.43 | 36.73 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 36.65 | 36.4 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 43.06 | 36.23 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 43.77 | 35.86 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 45.55 | 35.56 |
| CDY06359 | Canola | nucleus | 38.79 | 35.39 |
| CDY50901 | Canola | nucleus | 37.37 | 35.12 |
| Bra030783.1-P | Field mustard | nucleus | 43.06 | 35.07 |
| CDY31082 | Canola | nucleus | 43.06 | 34.97 |
| CDY22635 | Canola | nucleus | 38.43 | 34.95 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 42.7 | 34.88 |
| Bra031669.1-P | Field mustard | nucleus | 40.57 | 34.86 |
| CDY32188 | Canola | nucleus | 41.64 | 34.82 |
| Bra020016.1-P | Field mustard | nucleus | 40.93 | 34.64 |
| GSMUA_Achr11P... | Banana | nucleus | 45.55 | 34.13 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 43.06 | 33.61 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 44.48 | 33.33 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 43.77 | 32.28 |
| AT1G09540.1 | Thale cress | nucleus | 41.99 | 32.24 |
| Bra036588.1-P | Field mustard | nucleus | 37.72 | 31.64 |
| KRG90431 | Soybean | nucleus | 48.04 | 31.54 |
| KRH33726 | Soybean | nucleus | 48.04 | 31.47 |
| Zm00001d043729_P001 | Maize | nucleus | 25.62 | 31.44 |
| CDX87038 | Canola | nucleus | 37.72 | 31.36 |
| CDY68301 | Canola | nucleus | 37.37 | 31.34 |
| Zm00001d039700_P001 | Maize | nucleus | 26.33 | 30.96 |
| VIT_14s0060g00240.t01 | Wine grape | nucleus | 47.33 | 30.3 |
| KRH68389 | Soybean | nucleus | 44.13 | 29.67 |
| Zm00001d011669_P001 | Maize | nucleus | 25.27 | 29.58 |
| AT5G26660.1 | Thale cress | nucleus | 37.01 | 29.55 |
| CDX88230 | Canola | nucleus | 37.37 | 29.49 |
| KRG96660 | Soybean | nucleus | 45.55 | 29.49 |
| CDX80576 | Canola | nucleus | 37.37 | 29.41 |
| PGSC0003DMT400040774 | Potato | nucleus | 42.35 | 29.24 |
| Solyc10g044680.1.1 | Tomato | nucleus | 40.57 | 28.64 |
| Zm00001d009435_P001 | Maize | nucleus | 25.62 | 28.46 |
| PGSC0003DMT400047076 | Potato | nucleus | 43.06 | 28.4 |
| Solyc01g102340.2.1 | Tomato | nucleus | 42.7 | 28.17 |
| Zm00001d022259_P002 | Maize | nucleus | 34.52 | 27.79 |
| Zm00001d038878_P001 | Maize | nucleus | 31.67 | 27.64 |
| Zm00001d021537_P001 | Maize | nucleus | 27.4 | 25.41 |
| Zm00001d051267_P001 | Maize | nucleus | 24.2 | 24.46 |
| Zm00001d017383_P001 | Maize | nucleus | 25.27 | 24.4 |
| Zm00001d014989_P001 | Maize | nucleus | 26.33 | 24.03 |
| Bra009910.1-P | Field mustard | nucleus | 27.76 | 23.64 |
| Zm00001d008695_P001 | Maize | nucleus | 22.42 | 22.74 |
| Bra020526.1-P | Field mustard | nucleus | 35.59 | 22.73 |
| Zm00001d024630_P002 | Maize | nucleus | 26.69 | 20.72 |
| Zm00001d005055_P001 | Maize | nucleus | 14.95 | 18.5 |
| CDY05517 | Canola | plastid | 8.54 | 14.04 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | UniProt:A0A1D6MR71 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017877 | InterPro:IPR017930 | InterPro:Myb-like_dom | InterPro:Myb_dom |
| ProteinID:ONM31493.1 | PFAM:PF00249 | PFscan:PS50090 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF465 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000845566D | EnsemblPlantsGene:Zm00001d040527 | EnsemblPlants:Zm00001d040527_P001 |
| EnsemblPlants:Zm00001d040527_T001 | SEG:seg | : | : | : | : |
Description
MYB-transcription factor 128Transcription factor MYB86
Coordinates
chr3:-:48286239..48288111
Molecular Weight (calculated)
31240.3 Da
IEP (calculated)
5.981
GRAVY (calculated)
-0.652
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSCCYKQ KLRKGLWSPE EDEKLMNHIT KHGHGCWSTV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SEEEEDLIVE LHAVLGNSNE FGNKNGASNN
101: SLWFNHNETS GSTISTVMPP VSPSTLSTST GLNRSPDNPH SGGTGIQSTQ FYWDTANPSS CSSRGSSGSN GLGFELQSTS SLLESSVFPW TELTPDKNSQ
201: VHLGEELKWP DLLHGTFTDT PATMQNLSQS LYEDVIKAES QFNIEGLCAA WSQNLQPQQH LQVSDLYDKD LQRMSLSFEN I
101: SLWFNHNETS GSTISTVMPP VSPSTLSTST GLNRSPDNPH SGGTGIQSTQ FYWDTANPSS CSSRGSSGSN GLGFELQSTS SLLESSVFPW TELTPDKNSQ
201: VHLGEELKWP DLLHGTFTDT PATMQNLSQS LYEDVIKAES QFNIEGLCAA WSQNLQPQQH LQVSDLYDKD LQRMSLSFEN I
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
Arabidopsis Description
MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.