Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G26660.1 | KRH01133 | AT3G28715.1 | 21798944 |
| AT5G26660.1 | KRH40128 | AT3G28715.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008206_P001 | Maize | nucleus | 15.42 | 90.41 |
| KRH33726 | Soybean | nucleus | 88.32 | 88.11 |
| CDY05331 | Canola | nucleus | 27.1 | 87.88 |
| CDY05516 | Canola | nucleus | 26.87 | 87.12 |
| KRG96660 | Soybean | nucleus | 60.98 | 60.14 |
| KRH68389 | Soybean | nucleus | 58.64 | 60.05 |
| GSMUA_Achr11P... | Banana | nucleus | 30.61 | 56.22 |
| CDX93504 | Canola | nucleus | 38.08 | 55.44 |
| CDY22635 | Canola | nucleus | 39.95 | 55.34 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.51 | 55.27 |
| CDY06359 | Canola | nucleus | 39.49 | 54.87 |
| CDY50901 | Canola | nucleus | 38.32 | 54.85 |
| AT1G57560.1 | Thale cress | nucleus | 39.95 | 54.46 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 35.75 | 54.06 |
| Bra031669.1-P | Field mustard | nucleus | 40.89 | 53.52 |
| Bra020016.1-P | Field mustard | nucleus | 41.12 | 53.01 |
| CDY32188 | Canola | nucleus | 40.42 | 51.49 |
| VIT_14s0060g00240.t01 | Wine grape | nucleus | 52.1 | 50.8 |
| Bra030783.1-P | Field mustard | nucleus | 40.19 | 49.86 |
| CDY31082 | Canola | nucleus | 40.19 | 49.71 |
| AT1G09540.1 | Thale cress | nucleus | 42.06 | 49.18 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 35.05 | 48.86 |
| Zm00001d040527_P001 | Maize | nucleus | 31.54 | 48.04 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 38.55 | 47.97 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 39.95 | 47.5 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 37.85 | 47.23 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 39.72 | 46.58 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 36.22 | 46.41 |
| Zm00001d024784_P001 | Maize | nucleus | 27.57 | 46.09 |
| Solyc01g102340.2.1 | Tomato | nucleus | 45.56 | 45.77 |
| PGSC0003DMT400047076 | Potato | nucleus | 45.56 | 45.77 |
| PGSC0003DMT400040774 | Potato | nucleus | 43.46 | 45.7 |
| Os05t0140100-01 | Rice | nucleus | 45.33 | 45.43 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 39.25 | 45.41 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 38.08 | 45.28 |
| Zm00001d010907_P001 | Maize | nucleus | 44.63 | 44.84 |
| Solyc10g044680.1.1 | Tomato | nucleus | 41.59 | 44.72 |
| OQU77376 | Sorghum | nucleus | 44.63 | 44.42 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 39.49 | 44.36 |
| TraesCS1B01G100600.1 | Wheat | nucleus | 44.63 | 44.32 |
| HORVU1Hr1G017970.4 | Barley | nucleus | 44.39 | 44.29 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 38.78 | 44.27 |
| TraesCS1D01G084400.1 | Wheat | nucleus | 44.16 | 44.06 |
| TraesCS1A01G083100.2 | Wheat | nucleus | 44.16 | 43.95 |
| EES02806 | Sorghum | nucleus | 43.46 | 43.56 |
| Bra036588.1-P | Field mustard | nucleus | 33.88 | 43.28 |
| Os01t0285300-01 | Rice | nucleus | 43.22 | 43.22 |
| GSMUA_Achr11P... | Banana | nucleus | 37.85 | 43.2 |
| CDX87038 | Canola | nucleus | 34.11 | 43.2 |
| CDY68301 | Canola | nucleus | 33.64 | 42.99 |
| AT5G26660.1 | Thale cress | nucleus | 35.28 | 42.9 |
| KRH68350 | Soybean | nucleus | 41.59 | 42.58 |
| CDX88230 | Canola | nucleus | 34.81 | 41.85 |
| KRH63612 | Soybean | nucleus | 35.05 | 41.78 |
| CDX80576 | Canola | nucleus | 34.81 | 41.74 |
| KRH57123 | Soybean | nucleus | 35.75 | 41.35 |
| KRH69136 | Soybean | nucleus | 41.59 | 41.01 |
| KRH54334 | Soybean | nucleus | 34.35 | 40.38 |
| KRH03235 | Soybean | nucleus | 33.88 | 40.06 |
| KRH33667 | Soybean | nucleus | 41.82 | 39.25 |
| KRH35334 | Soybean | nucleus | 23.13 | 36.67 |
| KRG96619 | Soybean | plastid, vacuole | 41.82 | 36.16 |
| Bra009910.1-P | Field mustard | nucleus | 27.8 | 36.06 |
| KRH41236 | Soybean | nucleus | 25.7 | 34.27 |
| KRH43663 | Soybean | nucleus | 26.17 | 34.25 |
| KRH20828 | Soybean | nucleus | 24.77 | 34.08 |
| KRH09018 | Soybean | nucleus | 22.9 | 33.68 |
| KRH13791 | Soybean | nucleus | 25.47 | 33.54 |
| KRH27893 | Soybean | nucleus | 25.47 | 33.54 |
| KRH44125 | Soybean | nucleus | 26.87 | 32.95 |
| KRH59965 | Soybean | nucleus | 24.53 | 32.81 |
| KRH38485 | Soybean | nucleus | 22.2 | 32.65 |
| KRH77586 | Soybean | nucleus | 24.77 | 32.52 |
| KRH47101 | Soybean | nucleus | 26.64 | 32.39 |
| KRH27485 | Soybean | nucleus | 23.83 | 32.38 |
| KRG93751 | Soybean | nucleus | 25.23 | 32.14 |
| KRH18309 | Soybean | nucleus | 25.23 | 31.67 |
| Bra020526.1-P | Field mustard | nucleus | 32.48 | 31.59 |
| KRH10036 | Soybean | nucleus | 25.93 | 31.44 |
| KRH23131 | Soybean | nucleus | 23.36 | 30.21 |
| KRH24713 | Soybean | nucleus | 23.6 | 30.06 |
| KRH29717 | Soybean | nucleus | 23.83 | 30.0 |
| KRH10204 | Soybean | nucleus | 23.36 | 29.94 |
| KRG91494 | Soybean | nucleus | 22.9 | 29.43 |
| CDY05517 | Canola | plastid | 4.91 | 12.28 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:778072 | EMBL:ACUP02012613 | EnsemblPlantsGene:GLYMA_20G090700 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010119 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | UniProt:I1NET4 | InterPro:IPR017930 | EnsemblPlants:KRG90431 |
| ProteinID:KRG90431 | ProteinID:KRG90431.1 | EMBL:KT031206 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF885 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000233ED5B |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:-:33348669..33350887
Molecular Weight (calculated)
48291.1 Da
IEP (calculated)
7.249
GRAVY (calculated)
-0.791
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SQQEENMIVE LHAVLGNRWS QIAAQLPGRT
101: DNEIKNLWNS CLKKKLRQRG IDPNTHKPLS EVENEKDMMP PSTDKSTQKA SVGSNEVSLV DHHQQQPKIM PNSSSERYPL EVSTTSSTQE LFLDRFGTPT
201: TCHHHHNNNN TSDVVGSYFS FQHLNYGTTT NMSLSANPNA SLCFVPASTS SDLNNNSTIT SSMLPSIFPT QHVKLQSNNN NPSISSDGVQ NWETSNLNNS
301: NSTNKNNGSM QLQSCTNFID NTWGVGESMK VVNINKDADQ MPLQAEQEDL KWSEYLNTPF ILGNNTAQNH QIHTSQSIYS EVKPETGFIT DESCATWHHY
401: QNQTPAFQLS DIYSKDLQRF SVTFGQTL
101: DNEIKNLWNS CLKKKLRQRG IDPNTHKPLS EVENEKDMMP PSTDKSTQKA SVGSNEVSLV DHHQQQPKIM PNSSSERYPL EVSTTSSTQE LFLDRFGTPT
201: TCHHHHNNNN TSDVVGSYFS FQHLNYGTTT NMSLSANPNA SLCFVPASTS SDLNNNSTIT SSMLPSIFPT QHVKLQSNNN NPSISSDGVQ NWETSNLNNS
301: NSTNKNNGSM QLQSCTNFID NTWGVGESMK VVNINKDADQ MPLQAEQEDL KWSEYLNTPF ILGNNTAQNH QIHTSQSIYS EVKPETGFIT DESCATWHHY
401: QNQTPAFQLS DIYSKDLQRF SVTFGQTL
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
Arabidopsis Description
MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.