Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18309 | Soybean | nucleus | 91.37 | 90.03 |
| KRH27485 | Soybean | nucleus | 69.64 | 74.29 |
| Zm00001d023931_P001 | Maize | nucleus | 21.13 | 73.2 |
| KRH20828 | Soybean | nucleus | 67.26 | 72.67 |
| VIT_13s0064g00960.t01 | Wine grape | nucleus | 46.73 | 54.33 |
| GSMUA_Achr8P31350_001 | Banana | nucleus | 43.15 | 51.97 |
| GSMUA_Achr2P07780_001 | Banana | nucleus | 44.94 | 50.84 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.26 | 50.18 |
| Bra029696.1-P | Field mustard | nucleus | 48.81 | 49.25 |
| CDY35982 | Canola | nucleus | 48.81 | 48.96 |
| AT3G08500.1 | Thale cress | nucleus | 49.7 | 48.69 |
| KRH24713 | Soybean | nucleus | 48.51 | 48.51 |
| Solyc11g065840.1.1 | Tomato | nucleus | 50.89 | 48.44 |
| CDY27999 | Canola | nucleus | 48.21 | 48.36 |
| PGSC0003DMT400018995 | Potato | nucleus | 50.3 | 48.15 |
| CDX74013 | Canola | nucleus | 48.21 | 47.65 |
| Bra001284.1-P | Field mustard | nucleus | 48.21 | 47.65 |
| KRH29717 | Soybean | nucleus | 48.21 | 47.65 |
| CDY70536 | Canola | nucleus | 48.51 | 47.52 |
| KRH23131 | Soybean | nucleus | 45.54 | 46.22 |
| KRH10204 | Soybean | nucleus | 45.24 | 45.51 |
| TraesCS5A01G101000.1 | Wheat | nucleus | 45.24 | 39.07 |
| TraesCS5D01G113300.1 | Wheat | nucleus | 44.64 | 38.56 |
| TraesCS5B01G105900.1 | Wheat | nucleus | 44.35 | 38.21 |
| EES17106 | Sorghum | nucleus | 44.35 | 35.65 |
| KRH35334 | Soybean | nucleus | 25.6 | 31.85 |
| HORVU5Hr1G027750.1 | Barley | nucleus | 43.75 | 31.68 |
| KRH09018 | Soybean | nucleus | 26.49 | 30.58 |
| KRH41236 | Soybean | nucleus | 28.57 | 29.91 |
| KRH57123 | Soybean | nucleus | 32.74 | 29.73 |
| KRH38485 | Soybean | nucleus | 25.6 | 29.55 |
| KRH27893 | Soybean | nucleus | 28.27 | 29.23 |
| KRH59965 | Soybean | nucleus | 27.68 | 29.06 |
| KRH77586 | Soybean | nucleus | 27.98 | 28.83 |
| KRH63612 | Soybean | nucleus | 30.65 | 28.69 |
| KRH54334 | Soybean | nucleus | 30.65 | 28.3 |
| KRH03235 | Soybean | nucleus | 30.36 | 28.18 |
| KRH44125 | Soybean | nucleus | 28.87 | 27.79 |
| KRH10036 | Soybean | nucleus | 29.17 | 27.76 |
| KRH47101 | Soybean | nucleus | 28.57 | 27.27 |
| KRH13791 | Soybean | nucleus | 25.6 | 26.46 |
| KRH68350 | Soybean | nucleus | 32.74 | 26.32 |
| KRH68389 | Soybean | nucleus | 32.74 | 26.32 |
| KRH43663 | Soybean | nucleus | 25.3 | 25.99 |
| KRG91494 | Soybean | nucleus | 25.6 | 25.83 |
| KRG96660 | Soybean | nucleus | 33.33 | 25.81 |
| KRH33726 | Soybean | nucleus | 32.44 | 25.41 |
| KRG90431 | Soybean | nucleus | 32.14 | 25.23 |
| KRH69136 | Soybean | nucleus | 31.55 | 24.42 |
| KRH33667 | Soybean | nucleus | 33.04 | 24.34 |
| KRG96619 | Soybean | plastid, vacuole | 32.74 | 22.22 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100796379 | MapMan:15.5.2.1 | EMBL:ACUP02011617 | EnsemblPlantsGene:GLYMA_19G038100 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | UniProt:I1N6I2 | InterPro:IPR017930 | EnsemblPlants:KRG93751 | ProteinID:KRG93751 |
| ProteinID:KRG93751.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF915 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00023D9809 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr19:+:5350324..5355097
Molecular Weight (calculated)
37946.9 Da
IEP (calculated)
7.194
GRAVY (calculated)
-0.675
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKPDMMGKD KINNNIKSKL RKGLWSPEED EKLLRYMITK GQGCWSDIAR NAGLQRCGKS CRLRWINYLR PDLKRGAFSP QEEEVIIHLH SILGNRWSQI
101: AARLPGRTDN EIKNFWNSTL KKRLKMNNNN STLSPNNSDS SGPKDVNVMG GIMSMNEHDL MTMCMDSSSS TSSSSCMQSM HATNMVLTNP FPLLPNNRYD
201: MMTGATGFLD NMAAACLTQV GMVDHDHGVV HGTLEPNKTR LGSDFSLPPL ESRSIEDNSS TPIDHVKSHN NNNHFKNSCF NNTDHYHHIQ SSNNVVVEDL
301: FGFGNHGQGE NFRMGEWDLE GLMQDISYFP SLDFQV
101: AARLPGRTDN EIKNFWNSTL KKRLKMNNNN STLSPNNSDS SGPKDVNVMG GIMSMNEHDL MTMCMDSSSS TSSSSCMQSM HATNMVLTNP FPLLPNNRYD
201: MMTGATGFLD NMAAACLTQV GMVDHDHGVV HGTLEPNKTR LGSDFSLPPL ESRSIEDNSS TPIDHVKSHN NNNHFKNSCF NNTDHYHHIQ SSNNVVVEDL
301: FGFGNHGQGE NFRMGEWDLE GLMQDISYFP SLDFQV
001: MMMRKPDITT IRDKGKPNHA CGGNNNKPKL RKGLWSPDED EKLIRYMLTN GQGCWSDIAR NAGLLRCGKS CRLRWINYLR PDLKRGSFSP QEEDLIFHLH
101: SILGNRWSQI ATRLPGRTDN EIKNFWNSTL KKRLKNNSNN NTSSGSSPNN SNSNSLDPRD QHVDMGGNST SLMDDYHHDE NMMTVGNTMR MDSSSPFNVG
201: PMVNSVGLNQ LYDPLMISVP DNGYHQMGNT VNVFSVNGLG DYGNTILDPI SKRVSVEGDD WFIPPSENTN VIACSTSNNL NLQALDPCFN SKNLCHSESF
301: KVGNVLGIEN GSWEIENPKI GDWDLDGLID NNSSFPFLDF QVD
101: SILGNRWSQI ATRLPGRTDN EIKNFWNSTL KKRLKNNSNN NTSSGSSPNN SNSNSLDPRD QHVDMGGNST SLMDDYHHDE NMMTVGNTMR MDSSSPFNVG
201: PMVNSVGLNQ LYDPLMISVP DNGYHQMGNT VNVFSVNGLG DYGNTILDPI SKRVSVEGDD WFIPPSENTN VIACSTSNNL NLQALDPCFN SKNLCHSESF
301: KVGNVLGIEN GSWEIENPKI GDWDLDGLID NNSSFPFLDF QVD
Arabidopsis Description
MYB83Transcription factor MYB83 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6U1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.