Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G26660.1 | KRH01133 | AT3G28715.1 | 21798944 |
| AT5G26660.1 | KRH40128 | AT3G28715.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68389 | Soybean | nucleus | 90.32 | 93.78 |
| Zm00001d008206_P001 | Maize | nucleus | 15.21 | 90.41 |
| CDY05331 | Canola | nucleus | 26.73 | 87.88 |
| CDY05516 | Canola | nucleus | 26.5 | 87.12 |
| KRH33726 | Soybean | nucleus | 60.37 | 61.07 |
| KRG90431 | Soybean | nucleus | 60.14 | 60.98 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.41 | 57.45 |
| CDY22635 | Canola | nucleus | 40.09 | 56.31 |
| CDY06359 | Canola | nucleus | 39.4 | 55.52 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 35.94 | 55.12 |
| GSMUA_Achr11P... | Banana | nucleus | 29.49 | 54.94 |
| VIT_14s0060g00240.t01 | Wine grape | nucleus | 54.15 | 53.53 |
| Bra031669.1-P | Field mustard | nucleus | 40.32 | 53.52 |
| CDX93504 | Canola | nucleus | 36.18 | 53.4 |
| AT1G57560.1 | Thale cress | nucleus | 37.79 | 52.23 |
| CDY50901 | Canola | nucleus | 35.71 | 51.84 |
| Bra020016.1-P | Field mustard | nucleus | 39.17 | 51.2 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 39.4 | 49.85 |
| CDY32188 | Canola | nucleus | 38.02 | 49.11 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 38.48 | 48.55 |
| Bra030783.1-P | Field mustard | nucleus | 38.25 | 48.12 |
| CDY31082 | Canola | nucleus | 38.25 | 47.98 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 39.63 | 47.78 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 40.09 | 47.67 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 36.64 | 47.6 |
| AT1G09540.1 | Thale cress | nucleus | 40.09 | 47.54 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 40.09 | 47.03 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 33.18 | 46.91 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 40.09 | 46.4 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 38.48 | 46.39 |
| Zm00001d040527_P001 | Maize | nucleus | 29.49 | 45.55 |
| PGSC0003DMT400040774 | Potato | nucleus | 42.17 | 44.96 |
| Zm00001d024784_P001 | Maize | nucleus | 26.5 | 44.92 |
| PGSC0003DMT400047076 | Potato | nucleus | 44.01 | 44.84 |
| Solyc01g102340.2.1 | Tomato | nucleus | 43.55 | 44.37 |
| Solyc10g044680.1.1 | Tomato | nucleus | 40.55 | 44.22 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 38.71 | 44.09 |
| Os05t0140100-01 | Rice | nucleus | 43.09 | 43.79 |
| GSMUA_Achr11P... | Banana | nucleus | 37.56 | 43.47 |
| CDY68301 | Canola | nucleus | 33.41 | 43.28 |
| Bra036588.1-P | Field mustard | nucleus | 33.41 | 43.28 |
| CDX87038 | Canola | nucleus | 33.64 | 43.2 |
| OQU77376 | Sorghum | nucleus | 42.63 | 43.02 |
| Zm00001d010907_P001 | Maize | nucleus | 42.17 | 42.96 |
| AT5G26660.1 | Thale cress | nucleus | 34.79 | 42.9 |
| TraesCS1D01G084400.1 | Wheat | nucleus | 42.17 | 42.66 |
| KRH69136 | Soybean | nucleus | 42.63 | 42.63 |
| TraesCS1A01G083100.2 | Wheat | nucleus | 42.17 | 42.56 |
| HORVU1Hr1G017970.4 | Barley | nucleus | 41.94 | 42.42 |
| EES02806 | Sorghum | nucleus | 41.71 | 42.39 |
| KRH68350 | Soybean | nucleus | 40.78 | 42.34 |
| CDX80576 | Canola | nucleus | 34.79 | 42.3 |
| TraesCS1B01G100600.1 | Wheat | nucleus | 41.94 | 42.23 |
| CDX88230 | Canola | nucleus | 34.56 | 42.13 |
| Os01t0285300-01 | Rice | nucleus | 41.01 | 41.59 |
| KRH63612 | Soybean | nucleus | 34.1 | 41.23 |
| KRH54334 | Soybean | nucleus | 33.87 | 40.38 |
| KRH33667 | Soybean | nucleus | 42.4 | 40.35 |
| KRH57123 | Soybean | nucleus | 33.41 | 39.19 |
| KRH03235 | Soybean | nucleus | 31.57 | 37.85 |
| Bra009910.1-P | Field mustard | nucleus | 27.65 | 36.36 |
| KRG96619 | Soybean | plastid, vacuole | 41.47 | 36.36 |
| KRH35334 | Soybean | nucleus | 22.12 | 35.56 |
| KRH41236 | Soybean | nucleus | 26.27 | 35.51 |
| KRH27893 | Soybean | nucleus | 26.27 | 35.08 |
| KRH77586 | Soybean | nucleus | 26.04 | 34.66 |
| KRH43663 | Soybean | nucleus | 26.04 | 34.56 |
| KRH59965 | Soybean | nucleus | 25.35 | 34.38 |
| KRH20828 | Soybean | nucleus | 24.42 | 34.08 |
| KRH09018 | Soybean | nucleus | 22.58 | 33.68 |
| KRH13791 | Soybean | nucleus | 25.12 | 33.54 |
| KRH44125 | Soybean | nucleus | 26.96 | 33.52 |
| KRH18309 | Soybean | nucleus | 26.27 | 33.43 |
| KRG93751 | Soybean | nucleus | 25.81 | 33.33 |
| KRH27485 | Soybean | nucleus | 24.19 | 33.33 |
| KRH47101 | Soybean | nucleus | 26.73 | 32.95 |
| KRH38485 | Soybean | nucleus | 21.89 | 32.65 |
| KRH10036 | Soybean | nucleus | 26.5 | 32.58 |
| Bra020526.1-P | Field mustard | nucleus | 32.03 | 31.59 |
| KRH24713 | Soybean | nucleus | 24.19 | 31.25 |
| KRH10204 | Soybean | nucleus | 23.73 | 30.84 |
| KRH23131 | Soybean | nucleus | 23.5 | 30.82 |
| KRH29717 | Soybean | nucleus | 23.96 | 30.59 |
| KRG91494 | Soybean | nucleus | 22.58 | 29.43 |
| CDY05517 | Canola | plastid | 4.38 | 11.11 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100788976 | MapMan:15.5.2.1 | EMBL:ACUP02012162 | EnsemblPlantsGene:GLYMA_19G224600 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010119 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | UniProt:I1NBM2 | InterPro:IPR017930 | EnsemblPlants:KRG96660 |
| ProteinID:KRG96660 | ProteinID:KRG96660.1 | ProteinID:KRG96661.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF934 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000233E746 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:47678765..47681323
Molecular Weight (calculated)
48448.3 Da
IEP (calculated)
7.404
GRAVY (calculated)
-0.769
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SQQEENSIIE LHAVLGNRWS QIAAQLPGRT
101: DNEIKNLWNS CLKKKLRQRG IDPNTHQPLS EVENDKDKPL TADKSNQKAS NEVSLIEPPK PKPISTTSMP MDRYPLEVSS TFKISGGNNN NNNSNSTLDR
201: FDSSITSSDM MGMGYFPFQH LNYGSNMGLT TTPNNTPLCF MPSSTSSQMM SELNSTMLHS MFPTHVKPTV SLHSNNNNNP SSISSDGVQN WETSTFSNNN
301: NASKSNGSSS CSIQLQSGST NFLDHSSTIT WGLQAESATK ADKDAHVVVP LQSSEQEDIK WSEYLNNTPF SLGTMSVQHQ TTNSLYSSDE VKPETTGFIA
401: DESSTSWHHS QHFQPSEIYT KDLQRFSVAF GQTL
101: DNEIKNLWNS CLKKKLRQRG IDPNTHQPLS EVENDKDKPL TADKSNQKAS NEVSLIEPPK PKPISTTSMP MDRYPLEVSS TFKISGGNNN NNNSNSTLDR
201: FDSSITSSDM MGMGYFPFQH LNYGSNMGLT TTPNNTPLCF MPSSTSSQMM SELNSTMLHS MFPTHVKPTV SLHSNNNNNP SSISSDGVQN WETSTFSNNN
301: NASKSNGSSS CSIQLQSGST NFLDHSSTIT WGLQAESATK ADKDAHVVVP LQSSEQEDIK WSEYLNNTPF SLGTMSVQHQ TTNSLYSSDE VKPETTGFIA
401: DESSTSWHHS QHFQPSEIYT KDLQRFSVAF GQTL
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
Arabidopsis Description
MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.