Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030783.1-P | Field mustard | nucleus | 98.55 | 98.84 |
| CDY32188 | Canola | nucleus | 91.91 | 94.64 |
| Zm00001d008206_P001 | Maize | nucleus | 19.08 | 90.41 |
| CDY50901 | Canola | nucleus | 75.72 | 87.63 |
| CDX93504 | Canola | nucleus | 73.99 | 87.07 |
| CDY05516 | Canola | nucleus | 32.37 | 84.85 |
| CDY05331 | Canola | nucleus | 32.08 | 84.09 |
| AT1G09540.1 | Thale cress | nucleus | 88.15 | 83.33 |
| CDY06359 | Canola | nucleus | 52.6 | 59.09 |
| CDY22635 | Canola | nucleus | 51.73 | 57.93 |
| GSMUA_Achr11P... | Banana | nucleus | 36.13 | 53.65 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.46 | 50.91 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 38.15 | 46.64 |
| Zm00001d024784_P001 | Maize | nucleus | 33.53 | 45.31 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 39.6 | 44.63 |
| Zm00001d040527_P001 | Maize | nucleus | 34.97 | 43.06 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 41.91 | 42.27 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 41.62 | 41.86 |
| Os05t0140100-01 | Rice | nucleus | 51.45 | 41.69 |
| OQU77376 | Sorghum | nucleus | 51.45 | 41.4 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 44.22 | 41.35 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 42.77 | 41.11 |
| Zm00001d010907_P001 | Maize | nucleus | 50.58 | 41.08 |
| TraesCS1D01G084400.1 | Wheat | nucleus | 50.58 | 40.79 |
| HORVU1Hr1G017970.4 | Barley | nucleus | 50.58 | 40.79 |
| EES02806 | Sorghum | nucleus | 50.29 | 40.75 |
| TraesCS1A01G083100.2 | Wheat | nucleus | 50.58 | 40.7 |
| Os01t0285300-01 | Rice | nucleus | 50.29 | 40.65 |
| TraesCS1B01G100600.1 | Wheat | nucleus | 50.58 | 40.6 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 42.77 | 40.55 |
| KRH33726 | Soybean | nucleus | 50.0 | 40.33 |
| KRG90431 | Soybean | nucleus | 49.71 | 40.19 |
| CDY68301 | Canola | nucleus | 38.73 | 40.0 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 43.35 | 40.0 |
| CDX87038 | Canola | nucleus | 39.02 | 39.94 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 38.44 | 39.82 |
| CDY58217 | Canola | nucleus | 38.44 | 39.58 |
| CDY07124 | Canola | nucleus | 38.44 | 39.58 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 41.04 | 39.44 |
| VIT_14s0060g00240.t01 | Wine grape | nucleus | 50.0 | 39.41 |
| KRH68389 | Soybean | nucleus | 47.4 | 39.23 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 42.77 | 38.85 |
| KRG96660 | Soybean | nucleus | 47.98 | 38.25 |
| GSMUA_Achr11P... | Banana | nucleus | 41.33 | 38.13 |
| CDX88230 | Canola | nucleus | 39.02 | 37.92 |
| CDX80576 | Canola | nucleus | 39.02 | 37.82 |
| Solyc10g044680.1.1 | Tomato | nucleus | 43.06 | 37.44 |
| PGSC0003DMT400040774 | Potato | nucleus | 43.93 | 37.35 |
| PGSC0003DMT400047076 | Potato | nucleus | 45.66 | 37.09 |
| Solyc01g102340.2.1 | Tomato | nucleus | 45.38 | 36.85 |
| CDY32589 | Canola | nucleus | 25.43 | 35.06 |
| CDY38910 | Canola | nucleus | 26.01 | 33.71 |
| CDX85684 | Canola | nucleus | 27.17 | 33.69 |
| CDY53970 | Canola | nucleus | 27.17 | 33.57 |
| CDX91158 | Canola | nucleus | 26.88 | 33.45 |
| CDY43404 | Canola | nucleus | 28.32 | 33.33 |
| CDX78493 | Canola | nucleus | 26.88 | 33.21 |
| CDY50197 | Canola | nucleus | 23.99 | 33.2 |
| CDX94440 | Canola | nucleus | 24.57 | 33.07 |
| CDY42172 | Canola | nucleus | 28.03 | 32.99 |
| CDY42171 | Canola | nucleus | 28.03 | 32.99 |
| CDY08409 | Canola | nucleus | 28.03 | 32.99 |
| CDX89413 | Canola | nucleus | 25.43 | 32.59 |
| CDX92718 | Canola | nucleus | 23.99 | 31.68 |
| CDY64708 | Canola | nucleus | 23.12 | 31.01 |
| CDY27999 | Canola | nucleus | 28.9 | 29.85 |
| CDY05881 | Canola | nucleus | 22.25 | 29.84 |
| CDY37496 | Canola | nucleus | 30.64 | 29.69 |
| CDY39077 | Canola | nucleus | 30.64 | 29.69 |
| CDY55231 | Canola | nucleus | 28.03 | 29.57 |
| CDY35982 | Canola | nucleus | 28.61 | 29.55 |
| CDX97526 | Canola | nucleus | 28.03 | 28.61 |
| CDX74013 | Canola | nucleus | 27.75 | 28.24 |
| CDY70536 | Canola | nucleus | 27.75 | 27.99 |
| CDY38211 | Canola | nucleus | 29.77 | 27.91 |
| CDY08343 | Canola | nucleus | 29.77 | 27.91 |
| CDY25547 | Canola | nucleus | 29.48 | 27.57 |
| CDX97209 | Canola | nucleus | 26.3 | 25.71 |
| CDY34386 | Canola | extracellular | 11.85 | 13.67 |
| CDY05517 | Canola | plastid | 5.78 | 11.7 |
| CDY70602 | Canola | nucleus, plastid | 2.31 | 5.13 |
| CDY70493 | Canola | cytosol, plastid | 0.87 | 2.27 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078H0U7 | UniProt:A0A078H0U7 | EnsemblPlants:CDY31082 | ProteinID:CDY31082 |
| ProteinID:CDY31082.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00047158001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF910 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE11D6 | SEG:seg |
Description
BnaA08g26320DBnaA08g26320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0U7]
Coordinates
chrLK032267:-:165126..166803
Molecular Weight (calculated)
38954.1 Da
IEP (calculated)
8.290
GRAVY (calculated)
-0.772
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLNHIT HHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHSVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVDKDKPTRS SNNDHKSPSS SAATNQDFFL ERPSDFSDYF GLQKLNFNSN LTPESSMCSI VPGQFSPGNM
201: VGSVFQTPVC VKPSISLPTD NSSSTVSRGD HAGSNWEFQT NNTSNFFENS GFSWSIPSSS VTKPNHNFEE VKWSDYLNTP FFNSSTVQSQ NSQQIYIKSE
301: AEYLAKVSNI TDPWSQSQNE NLSTSEASDV FSKDLQRMAV SFGQSL
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVDKDKPTRS SNNDHKSPSS SAATNQDFFL ERPSDFSDYF GLQKLNFNSN LTPESSMCSI VPGQFSPGNM
201: VGSVFQTPVC VKPSISLPTD NSSSTVSRGD HAGSNWEFQT NNTSNFFENS GFSWSIPSSS VTKPNHNFEE VKWSDYLNTP FFNSSTVQSQ NSQQIYIKSE
301: AEYLAKVSNI TDPWSQSQNE NLSTSEASDV FSKDLQRMAV SFGQSL
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
Arabidopsis Description
MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.