Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70602 | Canola | nucleus, plastid | 77.27 | 65.38 |
| CDY42172 | Canola | nucleus | 100.0 | 44.9 |
| CDY08409 | Canola | nucleus | 100.0 | 44.9 |
| CDY42171 | Canola | nucleus | 96.97 | 43.54 |
| CDY43404 | Canola | nucleus | 78.79 | 35.37 |
| CDY22635 | Canola | nucleus | 7.58 | 3.24 |
| CDX85684 | Canola | nucleus | 6.82 | 3.23 |
| CDX94440 | Canola | nucleus | 6.06 | 3.11 |
| CDY06359 | Canola | nucleus | 6.82 | 2.92 |
| CDX91158 | Canola | nucleus | 6.06 | 2.88 |
| CDX78493 | Canola | nucleus | 6.06 | 2.86 |
| CDY53970 | Canola | nucleus | 6.06 | 2.86 |
| CDX97209 | Canola | nucleus | 6.82 | 2.54 |
| CDY37496 | Canola | nucleus | 6.82 | 2.52 |
| CDY50197 | Canola | nucleus | 4.55 | 2.4 |
| CDY32589 | Canola | nucleus | 4.55 | 2.39 |
| CDX97526 | Canola | nucleus | 6.06 | 2.36 |
| CDY05517 | Canola | plastid | 3.03 | 2.34 |
| CDY05881 | Canola | nucleus | 4.55 | 2.33 |
| CDX92718 | Canola | nucleus | 4.55 | 2.29 |
| CDX89413 | Canola | nucleus | 4.55 | 2.22 |
| CDY55231 | Canola | nucleus | 5.3 | 2.13 |
| CDY27999 | Canola | nucleus | 5.3 | 2.09 |
| CDY35982 | Canola | nucleus | 5.3 | 2.09 |
| CDY39077 | Canola | nucleus | 5.3 | 1.96 |
| CDY38211 | Canola | nucleus | 5.3 | 1.9 |
| CDY08343 | Canola | nucleus | 5.3 | 1.9 |
| CDY38910 | Canola | nucleus | 3.79 | 1.87 |
| CDX74013 | Canola | nucleus | 4.55 | 1.76 |
| CDY70536 | Canola | nucleus | 4.55 | 1.75 |
| CDX88230 | Canola | nucleus | 4.55 | 1.69 |
| CDX80576 | Canola | nucleus | 4.55 | 1.68 |
| CDY34386 | Canola | extracellular | 3.79 | 1.67 |
| CDY07124 | Canola | nucleus | 3.79 | 1.49 |
| CDY58217 | Canola | nucleus | 3.79 | 1.49 |
| CDY25547 | Canola | nucleus | 3.79 | 1.35 |
| CDY64708 | Canola | nucleus | 2.27 | 1.16 |
| CDX93504 | Canola | nucleus | 2.27 | 1.02 |
| CDY50901 | Canola | nucleus | 2.27 | 1.0 |
| CDY32188 | Canola | nucleus | 2.27 | 0.89 |
| CDY31082 | Canola | nucleus | 2.27 | 0.87 |
| CDY68301 | Canola | nucleus | 1.52 | 0.6 |
| CDX87038 | Canola | nucleus | 1.52 | 0.59 |
| CDY05516 | Canola | nucleus | 0.0 | 0.0 |
| CDY05331 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY70493 | EnsemblPlantsGene:GSBRNA2T00003891001 | ProteinID:CDY70493 | ProteinID:CDY70493.1 | UniParc:UPI0004EF18A7 | UniProt:A0A078JSA8 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaAnng33850DBnaAnng33850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JSA8]
Coordinates
chrLK042284:+:466..864
Molecular Weight (calculated)
14630.9 Da
IEP (calculated)
3.699
GRAVY (calculated)
-0.450
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNPTFDQST TTFSITNVNP YSSNKPNKVK SPNQTTIPSQ TVIPIDHTMS SLLNDENMIP NWSNVDGMAP IHEEAPMFSS EKAVMGVEDD DLNMDILFNT
101: PSSSTFDPDF GSMFSSAMSM DFNPMDDLGW TF
101: PSSSTFDPDF GSMFSSAMSM DFNPMDDLGW TF
001: MREKWEMKRD EMGHRCCGKH KVKRGLWSPE EDEKLLRYIT THGHPSWSSV PKLAGLQRCG KSCRLRWINY LRPDLRRGSF NEEEEQIIID VHRILGNKWA
101: QIAKHLPGRT DNEVKNFWNS CIKKKLLSQG LDPSTHNLMP SHKRSSSSNN NNIPKPNKTT SIMKNPTDLD QSTTAFSITN INPPTSTKPN KLKSPNQTTI
201: PSQTVIPIND NMSSTQTMIP INDPMSSLLD DENMIPHWSD VDGMAIHEAP MLPSDKAVVG VDDDDLNMDI LFNTPSSSAF DPDFASIFSS AMSIDFNPMD
301: DLGSWTF
101: QIAKHLPGRT DNEVKNFWNS CIKKKLLSQG LDPSTHNLMP SHKRSSSSNN NNIPKPNKTT SIMKNPTDLD QSTTAFSITN INPPTSTKPN KLKSPNQTTI
201: PSQTVIPIND NMSSTQTMIP INDPMSSLLD DENMIPHWSD VDGMAIHEAP MLPSDKAVVG VDDDDLNMDI LFNTPSSSAF DPDFASIFSS AMSIDFNPMD
301: DLGSWTF
Arabidopsis Description
ATY53AT3g12720/MBK21_8 [Source:UniProtKB/TrEMBL;Acc:Q9LTW2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.