Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG96619 | Soybean | plastid, vacuole | 94.74 | 80.0 |
| KRH69136 | Soybean | nucleus | 72.25 | 69.59 |
| KRH33667 | Soybean | nucleus | 72.49 | 66.45 |
| GSMUA_Achr11P... | Banana | nucleus | 30.62 | 54.94 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.17 | 53.45 |
| VIT_07s0005g02480.t01 | Wine grape | nucleus | 56.94 | 52.77 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 34.93 | 51.59 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 35.41 | 48.21 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 40.91 | 46.85 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 41.39 | 46.76 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 37.32 | 46.71 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 39.47 | 45.83 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 40.91 | 45.6 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 37.08 | 45.19 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 36.84 | 44.77 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 38.28 | 44.44 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 39.71 | 43.57 |
| KRH33726 | Soybean | nucleus | 43.06 | 41.96 |
| KRG90431 | Soybean | nucleus | 42.58 | 41.59 |
| PGSC0003DMT400047076 | Potato | nucleus | 42.34 | 41.55 |
| Solyc01g102340.2.1 | Tomato | nucleus | 42.34 | 41.55 |
| PGSC0003DMT400040774 | Potato | nucleus | 40.43 | 41.52 |
| KRH68389 | Soybean | nucleus | 41.15 | 41.15 |
| Solyc10g044680.1.1 | Tomato | nucleus | 39.0 | 40.95 |
| KRG96660 | Soybean | nucleus | 42.34 | 40.78 |
| Bra036317.1-P | Field mustard | nucleus | 32.54 | 40.48 |
| CDY07124 | Canola | nucleus | 32.54 | 40.48 |
| CDY58217 | Canola | nucleus | 32.54 | 40.48 |
| GSMUA_Achr11P... | Banana | nucleus | 35.89 | 40.0 |
| AT4G01680.2 | Thale cress | nucleus | 33.25 | 39.94 |
| KRH57123 | Soybean | nucleus | 34.93 | 39.46 |
| KRH54334 | Soybean | nucleus | 33.49 | 38.46 |
| KRH63612 | Soybean | nucleus | 33.01 | 38.44 |
| KRH03235 | Soybean | nucleus | 32.78 | 37.85 |
| KRH35334 | Soybean | nucleus | 22.97 | 35.56 |
| KRH27893 | Soybean | nucleus | 27.51 | 35.38 |
| KRH43663 | Soybean | nucleus | 27.27 | 34.86 |
| KRH77586 | Soybean | nucleus | 27.03 | 34.66 |
| KRH41236 | Soybean | nucleus | 26.55 | 34.58 |
| KRH59965 | Soybean | nucleus | 26.32 | 34.38 |
| KRH13791 | Soybean | nucleus | 26.55 | 34.15 |
| KRH20828 | Soybean | nucleus | 25.12 | 33.76 |
| KRH09018 | Soybean | nucleus | 23.45 | 33.68 |
| KRH27485 | Soybean | nucleus | 25.12 | 33.33 |
| KRH44125 | Soybean | nucleus | 27.75 | 33.24 |
| KRH24713 | Soybean | nucleus | 26.55 | 33.04 |
| KRH38485 | Soybean | nucleus | 22.97 | 32.99 |
| KRH47101 | Soybean | nucleus | 27.75 | 32.95 |
| KRH10036 | Soybean | nucleus | 27.75 | 32.86 |
| KRG93751 | Soybean | nucleus | 26.32 | 32.74 |
| KRH18309 | Soybean | nucleus | 26.32 | 32.26 |
| KRH10204 | Soybean | nucleus | 25.36 | 31.74 |
| KRH29717 | Soybean | nucleus | 25.6 | 31.47 |
| KRH23131 | Soybean | nucleus | 24.88 | 31.42 |
| KRG91494 | Soybean | nucleus | 22.73 | 28.53 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EMBL:ACUP02002107 | EnsemblPlantsGene:GLYMA_03G225200 | GO:GO:0000981 | GO:GO:0001135 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010119 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | UniProt:I1JQY1 | InterPro:IPR017930 | EnsemblPlants:KRH68350 | ProteinID:KRH68350 |
| ProteinID:KRH68350.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF465 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002339D73 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:+:42753936..42756032
Molecular Weight (calculated)
46767.6 Da
IEP (calculated)
7.003
GRAVY (calculated)
-0.719
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY LRPDLKRGTF SQEEENLIIE LHAVLGNRWS QIAAQLPGRT
101: DNEIKNLWNS CLKKKLRQRG IDPVTHKPLS EVENGEEGKT RSQELSNELN LLNSESFKSD EGSYEQRASS IAPKAYEMEG SCSSKINNTK NDTNLMSNCS
201: NKDMFLDSYT TSCQPSDLMG NYPLHITDTL PTNSNSCHWF SQTARPFDIN SNSEFTITSN VMSILPPTTT SFLPSTSFCY KPSLGVPSED ISAPSFGLNG
301: PSYWEASASN NSNGSNNTSD GSRELTTTSS KNSVLSSWEL TEEAKWSEYL HNPMLMLAAP ESLCNQIRPA THLIPDNTLG AIILPDSKNQ QQQQQQQSQN
401: SCIFSKDVQK LTAAFGHI
101: DNEIKNLWNS CLKKKLRQRG IDPVTHKPLS EVENGEEGKT RSQELSNELN LLNSESFKSD EGSYEQRASS IAPKAYEMEG SCSSKINNTK NDTNLMSNCS
201: NKDMFLDSYT TSCQPSDLMG NYPLHITDTL PTNSNSCHWF SQTARPFDIN SNSEFTITSN VMSILPPTTT SFLPSTSFCY KPSLGVPSED ISAPSFGLNG
301: PSYWEASASN NSNGSNNTSD GSRELTTTSS KNSVLSSWEL TEEAKWSEYL HNPMLMLAAP ESLCNQIRPA THLIPDNTLG AIILPDSKNQ QQQQQQQSQN
401: SCIFSKDVQK LTAAFGHI
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLRYIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY LRPDLKRGAF SQDEENLIIE LHAVLGNRWS QIAAQLPGRT
101: DNEIKNLWNS CLKKKLRLRG IDPVTHKLLT EIETGTDDKT KPVEKSQQTY LVETDGSSST TTCSTNQNNN TDHLYTGNFG FQRLSLENGS RIAAGSDLGI
201: WIPQTGRNHH HHVDETIPSA VVLPGSMFSS GLTGYRSSNL GLIELENSFS TGPMMTEHQQ IQESNYNNST FFGNGNLNWG LTMEENQNPF TISNHSNSSL
301: YSDIKSETNF FGTEATNVGM WPCNQLQPQQ HAYGHI
101: DNEIKNLWNS CLKKKLRLRG IDPVTHKLLT EIETGTDDKT KPVEKSQQTY LVETDGSSST TTCSTNQNNN TDHLYTGNFG FQRLSLENGS RIAAGSDLGI
201: WIPQTGRNHH HHVDETIPSA VVLPGSMFSS GLTGYRSSNL GLIELENSFS TGPMMTEHQQ IQESNYNNST FFGNGNLNWG LTMEENQNPF TISNHSNSSL
301: YSDIKSETNF FGTEATNVGM WPCNQLQPQQ HAYGHI
Arabidopsis Description
MYB55Myb domain protein 55 [Source:UniProtKB/TrEMBL;Acc:Q9ZSI4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.