Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59965 | Soybean | nucleus | 93.15 | 93.44 |
| KRH77586 | Soybean | nucleus | 81.31 | 80.06 |
| KRH27893 | Soybean | nucleus | 79.75 | 78.77 |
| VIT_02s0025g00320.t01 | Wine grape | nucleus | 69.78 | 73.68 |
| GSMUA_Achr10P... | Banana | nucleus | 52.96 | 57.24 |
| Solyc08g081500.1.1 | Tomato | nucleus | 58.26 | 56.5 |
| GSMUA_Achr6P36930_001 | Banana | nucleus | 51.09 | 52.73 |
| CDY38211 | Canola | nucleus | 58.57 | 50.95 |
| AT1G63910.1 | Thale cress | nucleus | 58.57 | 50.81 |
| CDY08343 | Canola | nucleus | 58.26 | 50.68 |
| CDY25547 | Canola | nucleus | 56.7 | 49.19 |
| HORVU7Hr1G072450.2 | Barley | nucleus | 47.98 | 45.16 |
| EES13346 | Sorghum | nucleus | 49.53 | 45.04 |
| TraesCS7D01G300000.1 | Wheat | nucleus | 47.98 | 44.9 |
| TraesCS7B01G204800.1 | Wheat | nucleus | 47.98 | 44.64 |
| TraesCS7A01G304500.1 | Wheat | nucleus | 47.66 | 44.61 |
| Os08t0151300-01 | Rice | nucleus | 48.91 | 43.73 |
| Zm00001d024630_P002 | Maize | nucleus | 47.98 | 42.54 |
| KRH35334 | Soybean | nucleus | 26.48 | 31.48 |
| KRH43663 | Soybean | nucleus | 31.15 | 30.58 |
| KRH47101 | Soybean | nucleus | 33.33 | 30.4 |
| KRH44125 | Soybean | nucleus | 33.02 | 30.37 |
| KRH63612 | Soybean | nucleus | 33.64 | 30.08 |
| KRH13791 | Soybean | nucleus | 30.22 | 29.85 |
| KRH20828 | Soybean | nucleus | 28.66 | 29.58 |
| KRH10036 | Soybean | nucleus | 32.4 | 29.46 |
| KRH54334 | Soybean | nucleus | 33.33 | 29.4 |
| KRH57123 | Soybean | nucleus | 33.33 | 28.92 |
| KRH09018 | Soybean | nucleus | 26.17 | 28.87 |
| KRH23131 | Soybean | nucleus | 29.59 | 28.7 |
| KRG93751 | Soybean | nucleus | 29.91 | 28.57 |
| KRH18309 | Soybean | nucleus | 30.22 | 28.45 |
| KRH10204 | Soybean | nucleus | 29.59 | 28.44 |
| KRH27485 | Soybean | nucleus | 27.73 | 28.25 |
| KRH03235 | Soybean | nucleus | 31.46 | 27.9 |
| KRH24713 | Soybean | nucleus | 28.97 | 27.68 |
| KRH38485 | Soybean | nucleus | 24.92 | 27.49 |
| KRH29717 | Soybean | nucleus | 28.66 | 27.06 |
| KRH68389 | Soybean | nucleus | 34.58 | 26.55 |
| KRH68350 | Soybean | nucleus | 34.58 | 26.55 |
| KRG96660 | Soybean | nucleus | 35.51 | 26.27 |
| KRH33726 | Soybean | nucleus | 34.89 | 26.11 |
| KRG91494 | Soybean | nucleus | 26.79 | 25.83 |
| KRG90431 | Soybean | nucleus | 34.27 | 25.7 |
| KRH69136 | Soybean | nucleus | 34.27 | 25.35 |
| KRH33667 | Soybean | nucleus | 34.58 | 24.34 |
| KRG96619 | Soybean | plastid, vacuole | 34.58 | 22.42 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EMBL:ACUP02004755 | EnsemblPlantsGene:GLYMA_08G017600 | GO:GO:0000981 | GO:GO:0001135 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 |
| InterPro:Homeobox-like_sf | UniProt:I1KPE8 | InterPro:IPR017930 | EnsemblPlants:KRH41236 | ProteinID:KRH41236 | ProteinID:KRH41236.1 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF451 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002338E47 | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:1416522..1419530
Molecular Weight (calculated)
36340.6 Da
IEP (calculated)
5.879
GRAVY (calculated)
-0.539
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY LRPDIRRGRF TPEEEKLIIS LHGVVGNRWA HIASHLPGRT
101: DNEIKNYWNS WIKKKIRKTS SVSSTTIAQS IDHNSSDQFN YNSNLVLDHF PNHDNNLQTK PPVQETLFSS TCPLFMFDTT SSLEAGTAID CNSTTVRAEH
201: FQDAVGLSTE TWNLSHHQVH ALPPLTVSVG LDTTNYLPPL IENVDNMVPI EVQSCTMDEQ GDIALECLQR RGLNEWMVET QQQCPNFLFW DSVEGQLGGE
301: ELAPNSSNVE ANMLSPFPSS L
101: DNEIKNYWNS WIKKKIRKTS SVSSTTIAQS IDHNSSDQFN YNSNLVLDHF PNHDNNLQTK PPVQETLFSS TCPLFMFDTT SSLEAGTAID CNSTTVRAEH
201: FQDAVGLSTE TWNLSHHQVH ALPPLTVSVG LDTTNYLPPL IENVDNMVPI EVQSCTMDEQ GDIALECLQR RGLNEWMVET QQQCPNFLFW DSVEGQLGGE
301: ELAPNSSNVE ANMLSPFPSS L
001: MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY LRPDIRRGRF SPEEEKLIIS LHGVVGNRWA HIASHLPGRT
101: DNEIKNYWNS WIKKKIRKPH HHYSRHQPSV TTVTLNADTT SIATTIEAST TTTSTIDNLH FDGFTDSPNQ LNFTNDQETN IKIQETFFSH KPPLFMVDTT
201: LPILEGMFSE NIITNNNKNN DHDDTQRGGR ENVCEQAFLT TNTEEWDMNL RQQEPFQVPT LASHVFNNSS NSNIDTVISY NLPALIEGNV DNIVHNENSN
301: VQDGEMASTF ECLKRQELSY DQWDDSQQCS NFFFWDNLNI NVEGSSLVGN QDPSMNLGSS ALSSSFPSSF
101: DNEIKNYWNS WIKKKIRKPH HHYSRHQPSV TTVTLNADTT SIATTIEAST TTTSTIDNLH FDGFTDSPNQ LNFTNDQETN IKIQETFFSH KPPLFMVDTT
201: LPILEGMFSE NIITNNNKNN DHDDTQRGGR ENVCEQAFLT TNTEEWDMNL RQQEPFQVPT LASHVFNNSS NSNIDTVISY NLPALIEGNV DNIVHNENSN
301: VQDGEMASTF ECLKRQELSY DQWDDSQQCS NFFFWDNLNI NVEGSSLVGN QDPSMNLGSS ALSSSFPSSF
Arabidopsis Description
AtMYB103MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SRB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.