Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G204800.1 | Wheat | nucleus | 68.25 | 71.01 |
| HORVU7Hr1G072450.2 | Barley | nucleus | 67.41 | 70.97 |
| TraesCS7A01G304500.1 | Wheat | nucleus | 67.41 | 70.55 |
| TraesCS7D01G300000.1 | Wheat | nucleus | 67.13 | 70.26 |
| EES13346 | Sorghum | nucleus | 64.07 | 65.16 |
| Zm00001d024630_P002 | Maize | nucleus | 64.07 | 63.54 |
| GSMUA_Achr10P... | Banana | nucleus | 42.9 | 51.85 |
| VIT_02s0025g00320.t01 | Wine grape | nucleus | 42.06 | 49.67 |
| KRH77586 | Soybean | nucleus | 44.85 | 49.39 |
| KRH41236 | Soybean | nucleus | 43.73 | 48.91 |
| GSMUA_Achr6P36930_001 | Banana | nucleus | 42.34 | 48.87 |
| KRH27893 | Soybean | nucleus | 44.01 | 48.62 |
| KRH59965 | Soybean | nucleus | 42.62 | 47.81 |
| Solyc08g081500.1.1 | Tomato | nucleus | 39.28 | 42.6 |
| AT1G63910.1 | Thale cress | nucleus | 42.9 | 41.62 |
| Bra027771.1-P | Field mustard | nucleus | 42.34 | 41.53 |
| Bra027668.1-P | Field mustard | nucleus | 42.06 | 40.92 |
| Os01t0709000-01 | Rice | nucleus | 27.58 | 32.25 |
| Os05t0543600-01 | Rice | nucleus | 27.02 | 31.09 |
| Os01t0702700-01 | Rice | nucleus | 25.91 | 30.9 |
| Os04t0532800-01 | Rice | nucleus | 23.4 | 30.77 |
| Os05t0140100-01 | Rice | nucleus | 30.08 | 25.29 |
| Os01t0285300-01 | Rice | nucleus | 28.69 | 24.07 |
| Os07t0497500-00 | Rice | nucleus | 25.91 | 23.25 |
| Os03t0371800-00 | Rice | nucleus | 25.07 | 22.61 |
| Os12t0515300-00 | Rice | nucleus | 11.14 | 12.78 |
| Os07t0634900-00 | Rice | plastid | 10.86 | 10.8 |
| CDY70602 | Canola | nucleus, plastid | 2.51 | 5.77 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:4344665 | EMBL:AK111808 | ProteinID:BAC64999.1 | ProteinID:BAF22911.1 |
| ProteinID:BAT03842.1 | ncoils:Coil | ProteinID:EAZ41524.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019748 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 |
| GO:GO:0045893 | GO:GO:1901430 | GO:GO:2000652 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| EnsemblPlantsGene:Os08g0151300 | EnsemblPlants:Os08t0151300-01 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF451 |
| UniProt:Q84PW8 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000045D3 | RefSeq:XP_015648990.1 |
| SEG:seg | : | : | : | : | : |
Description
CULM EASILY FRAGILE 1R2R3-MYB transcription factor, Regulation of leaf shape, cellulose synthesis and mechanical strength (Os08t0151300-01);Myb transcription factor domain containing protein. (Os08t0151300-02)
Coordinates
chr8:-:2948553..2951372
Molecular Weight (calculated)
39956.8 Da
IEP (calculated)
6.624
GRAVY (calculated)
-0.647
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY LRPDIRRGRF TAEEEKLIIS LHAIVGNRWA HIASHLPGRT
101: DNEIKNYWNS WIKKKIRKPA AAAAAATTTS PNNPPPCSTA TSDHHHLPPP AFGGADHHLQ LDAIINQNLI SSLPPKLATG DDSPPAVPGL PHHCPLFMFD
201: TTTTGAGGAI SPPPPSSLIP THLHHHHHPF IASFTAAMAA DTPSYLPPLV DGMAAMGAAM DCSLEDGQTA AAMAATNGYY QHHQKHQQLE IELEEEEQRQ
301: LGHHHHQHHH EHEHENHQWD EEEAQHLLMW DQEVLTSSNL EAMQSGAHSL LFMGPNDHD
101: DNEIKNYWNS WIKKKIRKPA AAAAAATTTS PNNPPPCSTA TSDHHHLPPP AFGGADHHLQ LDAIINQNLI SSLPPKLATG DDSPPAVPGL PHHCPLFMFD
201: TTTTGAGGAI SPPPPSSLIP THLHHHHHPF IASFTAAMAA DTPSYLPPLV DGMAAMGAAM DCSLEDGQTA AAMAATNGYY QHHQKHQQLE IELEEEEQRQ
301: LGHHHHQHHH EHEHENHQWD EEEAQHLLMW DQEVLTSSNL EAMQSGAHSL LFMGPNDHD
001: MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY LRPDIRRGRF SPEEEKLIIS LHGVVGNRWA HIASHLPGRT
101: DNEIKNYWNS WIKKKIRKPH HHYSRHQPSV TTVTLNADTT SIATTIEAST TTTSTIDNLH FDGFTDSPNQ LNFTNDQETN IKIQETFFSH KPPLFMVDTT
201: LPILEGMFSE NIITNNNKNN DHDDTQRGGR ENVCEQAFLT TNTEEWDMNL RQQEPFQVPT LASHVFNNSS NSNIDTVISY NLPALIEGNV DNIVHNENSN
301: VQDGEMASTF ECLKRQELSY DQWDDSQQCS NFFFWDNLNI NVEGSSLVGN QDPSMNLGSS ALSSSFPSSF
101: DNEIKNYWNS WIKKKIRKPH HHYSRHQPSV TTVTLNADTT SIATTIEAST TTTSTIDNLH FDGFTDSPNQ LNFTNDQETN IKIQETFFSH KPPLFMVDTT
201: LPILEGMFSE NIITNNNKNN DHDDTQRGGR ENVCEQAFLT TNTEEWDMNL RQQEPFQVPT LASHVFNNSS NSNIDTVISY NLPALIEGNV DNIVHNENSN
301: VQDGEMASTF ECLKRQELSY DQWDDSQQCS NFFFWDNLNI NVEGSSLVGN QDPSMNLGSS ALSSSFPSSF
Arabidopsis Description
AtMYB103MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SRB0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.