Factsheet for Bra027771.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38211	Canola	nucleus	95.9	95.12
CDY08343	Canola	nucleus	95.63	94.85
Bra027668.1-P	Field mustard	nucleus	86.34	85.64
AT1G63910.1	Thale cress	nucleus	84.97	84.05
GSMUA_Achr10P...	Banana	nucleus	42.08	51.85
GSMUA_Achr6P36930_001	Banana	nucleus	40.71	47.91
HORVU7Hr1G072450.2	Barley	nucleus	42.9	46.04
TraesCS7B01G204800.1	Wheat	nucleus	43.17	45.8
TraesCS7D01G300000.1	Wheat	nucleus	42.9	45.77
TraesCS7A01G304500.1	Wheat	nucleus	42.9	45.77
Os08t0151300-01	Rice	nucleus	41.53	42.34
EES13346	Sorghum	nucleus	40.71	42.21
Zm00001d024630_P002	Maize	nucleus	39.62	40.06
Bra013900.1-P	Field mustard	nucleus	21.04	35.81
Bra034738.1-P	Field mustard	nucleus	25.96	32.31
Bra039339.1-P	Field mustard	nucleus	25.96	32.31
Bra020016.1-P	Field mustard	nucleus	27.87	30.72
Bra008875.1-P	Field mustard	nucleus	23.5	30.71
Bra006166.1-P	Field mustard	nucleus	23.22	30.36
Bra021515.1-P	Field mustard	nucleus	29.51	30.34
Bra031669.1-P	Field mustard	nucleus	26.78	29.97
Bra030783.1-P	Field mustard	nucleus	28.14	29.86
Bra036317.1-P	Field mustard	nucleus	27.05	29.46
Bra018027.1-P	Field mustard	nucleus	20.22	28.68
Bra036588.1-P	Field mustard	nucleus	26.23	28.66
Bra027389.1-P	Field mustard	nucleus	27.05	28.45
Bra029129.1-P	Field mustard	nucleus	20.49	28.09
Bra029696.1-P	Field mustard	nucleus	24.04	26.43
Bra001284.1-P	Field mustard	nucleus	24.32	26.18
Bra009910.1-P	Field mustard	nucleus	20.49	22.73
Bra020526.1-P	Field mustard	nucleus	26.5	22.05
Bra023380.1-P	Field mustard	nucleus	9.56	16.83
Bra019154.1-P	Field mustard	nucleus	20.77	16.49

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EnsemblPlantsGene:Bra027771	EnsemblPlants:Bra027771.1	EnsemblPlants:Bra027771.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019748	GO:GO:0045893	GO:GO:1901430	GO:GO:2000652	InterPro:Homeobox-like_sf	InterPro:IPR017930
UniProt:M4EG58	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF451
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0002542211	SEG:seg	:

Description

AT1G63910 (E=3e-160) AtMYB103 | AtMYB103 (myb domain protein 103); DNA binding / transcription activator/ transcription factor

Coordinates

chrA09:-:6309482..6311322

Molecular Weight (calculated)

41569.3 Da

IEP (calculated)

6.389

GRAVY (calculated)

-0.696

Length

366 amino acids

Sequence
(BLAST)

001: MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY LRPDIRRGRF SLEEEKLIIS LHGVVGNRWA HIASHLPGRT
101: DNEIKNYWNS WIKKKIRKPH HHYNRHQPSI TTVTMNVDAT STGTAVPSTT STIDNLHFDS FMNSPNQLNF THDQETNTKI QETLFSHKNP LFIVDQTLPV
201: LEGMFSQNII TNNNNKNNDN DTRRGGRGGV FEQSFLTNNT EEWDMNLPQQ EPFQVPTMVS HSFNNSTSSN TETVISYNLP ALVEGNVDNI SPLDNSVQDG
301: DMASTLECLK KQELSYDQWI DSQQCSNFFL WDNLNINVEG SSLVGNQDPS VTLGSSALSS SFPSSF

Best Arabidopsis Sequence Match ( AT1G63910.1 )
(BLAST)

001: MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY LRPDIRRGRF SPEEEKLIIS LHGVVGNRWA HIASHLPGRT
101: DNEIKNYWNS WIKKKIRKPH HHYSRHQPSV TTVTLNADTT SIATTIEAST TTTSTIDNLH FDGFTDSPNQ LNFTNDQETN IKIQETFFSH KPPLFMVDTT
201: LPILEGMFSE NIITNNNKNN DHDDTQRGGR ENVCEQAFLT TNTEEWDMNL RQQEPFQVPT LASHVFNNSS NSNIDTVISY NLPALIEGNV DNIVHNENSN
301: VQDGEMASTF ECLKRQELSY DQWDDSQQCS NFFFWDNLNI NVEGSSLVGN QDPSMNLGSS ALSSSFPSSF

Arabidopsis Description

AtMYB103MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SRB0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.