Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023931_P001 | Maize | nucleus | 23.23 | 71.13 |
| GSMUA_Achr8P31350_001 | Banana | nucleus | 56.57 | 60.22 |
| GSMUA_AchrUn_... | Banana | nucleus | 53.87 | 56.54 |
| GSMUA_Achr4P25340_001 | Banana | nucleus | 22.56 | 47.18 |
| VIT_13s0064g00960.t01 | Wine grape | nucleus | 45.12 | 46.37 |
| PGSC0003DMT400018995 | Potato | nucleus | 54.21 | 45.87 |
| Solyc11g065840.1.1 | Tomato | nucleus | 53.87 | 45.33 |
| KRG93751 | Soybean | nucleus | 50.84 | 44.94 |
| KRH27485 | Soybean | nucleus | 47.47 | 44.76 |
| KRH20828 | Soybean | nucleus | 46.46 | 44.37 |
| KRH18309 | Soybean | nucleus | 49.49 | 43.11 |
| PGSC0003DMT400017709 | Potato | nucleus | 49.83 | 41.69 |
| Solyc01g087130.2.1 | Tomato | nucleus | 48.48 | 40.91 |
| Bra029696.1-P | Field mustard | nucleus | 45.12 | 40.24 |
| CDY35982 | Canola | nucleus | 45.12 | 40.0 |
| AT3G08500.1 | Thale cress | nucleus | 46.13 | 39.94 |
| TraesCS5D01G113300.1 | Wheat | nucleus | 51.52 | 39.33 |
| CDY27999 | Canola | nucleus | 44.11 | 39.1 |
| TraesCS5A01G101000.1 | Wheat | nucleus | 51.18 | 39.07 |
| TraesCS5B01G105900.1 | Wheat | nucleus | 49.83 | 37.95 |
| Bra001284.1-P | Field mustard | nucleus | 43.1 | 37.65 |
| CDX74013 | Canola | nucleus | 43.1 | 37.65 |
| CDY70536 | Canola | nucleus | 42.76 | 37.03 |
| GSMUA_Achr11P... | Banana | nucleus | 28.96 | 36.91 |
| EES17106 | Sorghum | nucleus | 50.17 | 35.65 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.99 | 34.55 |
| GSMUA_Achr4P19560_001 | Banana | nucleus | 31.99 | 33.57 |
| HORVU5Hr1G027750.1 | Barley | nucleus | 50.51 | 32.33 |
| GSMUA_Achr4P11960_001 | Banana | nucleus | 25.93 | 31.3 |
| GSMUA_Achr3P28540_001 | Banana | nucleus | 31.99 | 30.94 |
| GSMUA_Achr2P01830_001 | Banana | nucleus | 31.99 | 30.94 |
| GSMUA_Achr9P22190_001 | Banana | nucleus | 32.32 | 30.48 |
| GSMUA_Achr4P06410_001 | Banana | nucleus | 30.64 | 29.74 |
| GSMUA_Achr6P35800_001 | Banana | nucleus | 29.63 | 29.43 |
| GSMUA_Achr6P36930_001 | Banana | nucleus | 30.3 | 28.94 |
| GSMUA_Achr8P11340_001 | Banana | nucleus | 26.6 | 28.42 |
| GSMUA_Achr4P29410_001 | Banana | nucleus | 26.6 | 28.32 |
| GSMUA_Achr10P... | Banana | nucleus | 28.28 | 28.28 |
| GSMUA_Achr7P17250_001 | Banana | nucleus | 32.66 | 28.28 |
| GSMUA_Achr4P05410_001 | Banana | nucleus | 27.61 | 28.28 |
| GSMUA_Achr1P17480_001 | Banana | nucleus | 25.93 | 28.21 |
| GSMUA_Achr1P18990_001 | Banana | nucleus | 31.65 | 28.14 |
| GSMUA_Achr1P25120_001 | Banana | nucleus | 34.01 | 28.06 |
| GSMUA_Achr3P24580_001 | Banana | nucleus | 31.99 | 27.62 |
| GSMUA_Achr4P13280_001 | Banana | nucleus | 28.28 | 27.54 |
| GSMUA_Achr9P11190_001 | Banana | nucleus | 29.29 | 26.61 |
| GSMUA_Achr8P03510_001 | Banana | nucleus | 28.28 | 26.33 |
| GSMUA_Achr2P18440_001 | Banana | nucleus | 32.32 | 26.3 |
| GSMUA_Achr3P12200_001 | Banana | nucleus | 31.31 | 25.83 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 26.94 | 25.81 |
| GSMUA_Achr8P18730_001 | Banana | nucleus | 31.99 | 25.68 |
| GSMUA_Achr2P11450_001 | Banana | nucleus | 26.26 | 25.32 |
| GSMUA_Achr5P18400_001 | Banana | nucleus | 31.65 | 25.07 |
| GSMUA_Achr11P... | Banana | nucleus | 31.31 | 24.8 |
| GSMUA_Achr9P25110_001 | Banana | nucleus | 25.93 | 24.44 |
| GSMUA_Achr2P07930_001 | Banana | nucleus | 31.31 | 24.41 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P07780_001 | EnsemblPlants:GSMUA_Achr2T07780_001 | EnsemblPlantsGene:GSMUA_Achr2G07780_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF915 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002961265 | UniProt:M0S619 | MapMan:15.5.2.1 | : | : |
Description
myb-like DNA-binding domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G07780_001]
Coordinates
chr2:+:12087173..12088191
Molecular Weight (calculated)
32577.0 Da
IEP (calculated)
4.695
GRAVY (calculated)
-0.566
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKPDAPVKT DGTSTNSTND GGSRLRKGLW SPEEDEKLMN YMVGNGQGCW SEVARNAGLQ RCGKSCRLRW INYLRPGLKR GAFSLQEEEL IIHLHSILGN
101: RWSQISALLP GRTDNEIKNF WNSTIKKRLK NSSSSSSSSS SSSFFLNSGD GSTVNEPQIQ AMDMDSSSSS ASSSTHGLPT GNHYDLVPLP EVGLENDYYL
201: HEARVGTENG YYGGGQGMAM EGGGTMGRGG ELLLVPPLVN TNLIVDDNVD VNEIPSDKAV GGGLFWEGEK VRVGEWEWEL EDLMKDVSFP FLDFQVE
101: RWSQISALLP GRTDNEIKNF WNSTIKKRLK NSSSSSSSSS SSSFFLNSGD GSTVNEPQIQ AMDMDSSSSS ASSSTHGLPT GNHYDLVPLP EVGLENDYYL
201: HEARVGTENG YYGGGQGMAM EGGGTMGRGG ELLLVPPLVN TNLIVDDNVD VNEIPSDKAV GGGLFWEGEK VRVGEWEWEL EDLMKDVSFP FLDFQVE
001: MMMRKPDITT IRDKGKPNHA CGGNNNKPKL RKGLWSPDED EKLIRYMLTN GQGCWSDIAR NAGLLRCGKS CRLRWINYLR PDLKRGSFSP QEEDLIFHLH
101: SILGNRWSQI ATRLPGRTDN EIKNFWNSTL KKRLKNNSNN NTSSGSSPNN SNSNSLDPRD QHVDMGGNST SLMDDYHHDE NMMTVGNTMR MDSSSPFNVG
201: PMVNSVGLNQ LYDPLMISVP DNGYHQMGNT VNVFSVNGLG DYGNTILDPI SKRVSVEGDD WFIPPSENTN VIACSTSNNL NLQALDPCFN SKNLCHSESF
301: KVGNVLGIEN GSWEIENPKI GDWDLDGLID NNSSFPFLDF QVD
101: SILGNRWSQI ATRLPGRTDN EIKNFWNSTL KKRLKNNSNN NTSSGSSPNN SNSNSLDPRD QHVDMGGNST SLMDDYHHDE NMMTVGNTMR MDSSSPFNVG
201: PMVNSVGLNQ LYDPLMISVP DNGYHQMGNT VNVFSVNGLG DYGNTILDPI SKRVSVEGDD WFIPPSENTN VIACSTSNNL NLQALDPCFN SKNLCHSESF
301: KVGNVLGIEN GSWEIENPKI GDWDLDGLID NNSSFPFLDF QVD
Arabidopsis Description
MYB83Transcription factor MYB83 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6U1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.