CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU86237	Sorghum	nucleus	41.9	39.41
Zm00001d005055_P001	Maize	nucleus	32.41	36.12
EES02393	Sorghum	nucleus	35.18	31.79
EES03490	Sorghum	nucleus	34.39	27.71
EES18602	Sorghum	nucleus	34.39	27.02
EES03100	Sorghum	nucleus	36.36	26.98
EER92216	Sorghum	nucleus	33.6	25.76
PGSC0003DMT400069644	Potato	nucleus	31.23	25.08
Solyc06g071690.2.1	Tomato	nucleus	31.62	24.92
Solyc03g112390.2.1	Tomato	nucleus	31.62	24.62
PGSC0003DMT400046645	Potato	nucleus	31.62	24.62
KRH63612	Soybean	nucleus	34.39	24.23
EES03504	Sorghum	nucleus	30.04	23.82
KRH54334	Soybean	nucleus	33.99	23.63
VIT_17s0000g09080.t01	Wine grape	nucleus	33.6	23.42
EES06150	Sorghum	nucleus	27.67	23.41
KRH57123	Soybean	nucleus	33.6	22.97
KRH03235	Soybean	nucleus	31.23	21.82
EES11177	Sorghum	nucleus	25.69	21.81
EER97608	Sorghum	nucleus	32.81	21.78
EES13346	Sorghum	nucleus	29.25	20.96
EES02806	Sorghum	nucleus	33.99	20.14
EES07547	Sorghum	nucleus	23.72	19.67
OQU77376	Sorghum	nucleus	32.81	19.3
EES17106	Sorghum	nucleus	31.62	19.14
EER97244	Sorghum	nucleus	27.67	18.23

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	UniProt:C5Y3I1	EnsemblPlants:EES07893	ProteinID:EES07893	ProteinID:EES07893.2
GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF661	InterPro:SANT/Myb	SMART:SM00717	EnsemblPlantsGene:SORBI_3005G014100
SUPFAM:SSF46689	UniParc:UPI00081AD70E	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:1298696..1299984

Molecular Weight (calculated)

28715.6 Da

IEP (calculated)

6.609

GRAVY (calculated)

-0.839

Length

253 amino acids

Sequence
(BLAST)

001: MERRKRAMVS DQLEQEDKKL MRKGLWSPDE DERLYSHITH YGVGTWSSVA ELAGLKRSGK SCRLRWMNYL QPDLSREPIS KQEEDLIVSL QKLLGNRWSA
101: IAARMPGRTD NEIKNYWNSR IKKKLQQRMN TGGNYQSPLA VHQTAEERDA DMNTGGNPKA DLYGQAATTS EVQVHHSTTT SYNNSADHPS LPHQLPLFTG
201: QPLLDPNAAA IQNGEHTAAQ SSLDVSFSKS HERNFVEEYV EFLMSLSDDL QEI

Best Arabidopsis Sequence Match ( AT1G09540.1 )
(BLAST)

001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL

Arabidopsis Description

MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.