Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G371800.1 | Wheat | nucleus | 86.85 | 86.55 |
| TraesCS1B01G383800.1 | Wheat | nucleus | 86.16 | 86.46 |
| TraesCS1A01G366200.1 | Wheat | nucleus | 86.85 | 84.8 |
| TraesCS1B01G383700.1 | Wheat | nucleus | 83.39 | 82.25 |
| TraesCS1B01G383600.1 | Wheat | nucleus | 82.7 | 78.36 |
| TraesCS3B01G286500.1 | Wheat | nucleus | 64.36 | 66.19 |
| Zm00001d009435_P001 | Maize | nucleus | 57.09 | 65.22 |
| HORVU1Hr1G079040.4 | Barley | nucleus, plastid | 78.55 | 64.49 |
| Os05t0543600-01 | Rice | nucleus | 69.2 | 64.1 |
| EES18602 | Sorghum | nucleus | 70.59 | 63.35 |
| TraesCS2B01G178000.1 | Wheat | nucleus | 31.14 | 46.15 |
| TraesCS3B01G224500.1 | Wheat | nucleus | 43.94 | 40.97 |
| PGSC0003DMT400069644 | Potato | nucleus | 39.79 | 36.51 |
| TraesCS7B01G244200.1 | Wheat | nucleus | 35.99 | 35.86 |
| Solyc06g071690.2.1 | Tomato | nucleus | 39.79 | 35.83 |
| TraesCS4B01G312100.1 | Wheat | nucleus | 31.83 | 35.25 |
| VIT_17s0000g09080.t01 | Wine grape | nucleus | 42.91 | 34.16 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 35.99 | 33.55 |
| PGSC0003DMT400046645 | Potato | nucleus | 37.37 | 33.23 |
| Solyc03g112390.2.1 | Tomato | nucleus | 37.37 | 33.23 |
| KRH63612 | Soybean | nucleus | 41.18 | 33.15 |
| KRH57123 | Soybean | nucleus | 42.21 | 32.97 |
| KRH54334 | Soybean | nucleus | 41.18 | 32.69 |
| KRH03235 | Soybean | nucleus | 40.83 | 32.6 |
| TraesCS3B01G280700.1 | Wheat | nucleus | 31.49 | 31.82 |
| TraesCS2B01G387300.1 | Wheat | nucleus | 29.76 | 31.39 |
| TraesCS2B01G177900.1 | Wheat | nucleus | 39.1 | 31.3 |
| TraesCS2B01G387700.1 | Wheat | nucleus | 29.41 | 31.02 |
| TraesCS2B01G387800.1 | Wheat | nucleus | 29.41 | 30.47 |
| TraesCS2B01G387500.1 | Wheat | nucleus | 29.07 | 29.68 |
| TraesCS3B01G109800.1 | Wheat | nucleus | 29.07 | 29.58 |
| TraesCS6B01G265200.1 | Wheat | nucleus | 29.07 | 28.47 |
| TraesCS7B01G204800.1 | Wheat | nucleus | 32.87 | 27.54 |
| TraesCS1B01G100600.1 | Wheat | nucleus | 40.83 | 27.38 |
| TraesCS6B01G053100.1 | Wheat | nucleus | 28.03 | 26.3 |
| TraesCS2B01G252000.1 | Wheat | nucleus | 33.22 | 25.13 |
| TraesCS5B01G105900.1 | Wheat | nucleus | 33.22 | 24.62 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G383900.1 | EnsemblPlantsGene:TraesCS1B01G383900 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF597 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1B:-:616131635..616132630
Molecular Weight (calculated)
31892.1 Da
IEP (calculated)
5.826
GRAVY (calculated)
-0.639
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPTSGGVQ QQQPKLRKGL WSPEEDEKLY GHIIRYGVGC WSSVPRLAGL HRCGKSCRLR WLNYLRPDLK RGTFSQEEED HIVALHQILG NRWSHIASHL
101: PGRTDNEIKN FWNSCIKKKL RQQGIDPATH KPMGATATAA LPDAKEEDRK TLSAAVDGSL APKQQTVFAP FPVCADYGGG FAEDLSAGNA TALYGQFGGA
201: KEGADDDAGF GAGDYSCVLD VSENLGYRES SSNTNNWNYG GSVLDGEVLH WAKAEMEQQH DEPLEQKFSL PCTEQSLLAN SEFNLEQYF
101: PGRTDNEIKN FWNSCIKKKL RQQGIDPATH KPMGATATAA LPDAKEEDRK TLSAAVDGSL APKQQTVFAP FPVCADYGGG FAEDLSAGNA TALYGQFGGA
201: KEGADDDAGF GAGDYSCVLD VSENLGYRES SSNTNNWNYG GSVLDGEVLH WAKAEMEQQH DEPLEQKFSL PCTEQSLLAN SEFNLEQYF
001: MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
101: DNEIKNLWNS SIKKKLKQRG IDPNTHKPIS EVESFSDKDK PTTSNNKRSG NDHKSPSSSS ATNQDFFLER PSDLSDYFGF QKLNFNSNLG LSVTTDSSLC
201: SMIPPQFSPG NMVGSVLQTP VCVKPSISLP PDNNSSSPIS GGDHVKLAAP NWEFQTNNNN TSNFFDNGGF SWSIPNSSTS SSQVKPNHNF EEIKWSEYLN
301: TPFFIGSTVQ SQTSQPIYIK SETDYLANVS NMTDPWSQNE NLGTTETSDV FSKDLQRMAV SFGQSL
Arabidopsis Description
MYB61MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.