Factsheet for TraesCS2D01G158200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G152700.1	Wheat	nucleus	97.71	93.94
TraesCS2B01G177900.1	Wheat	nucleus	97.13	93.91
TraesCS2D01G158300.1	Wheat	nucleus	67.34	82.46
Zm00001d022259_P002	Maize	nucleus	68.48	68.48
EER97608	Sorghum	nucleus	71.92	65.88
TraesCS7D01G340300.1	Wheat	nucleus	49.0	59.58
TraesCS4D01G309700.1	Wheat	nucleus	27.79	44.09
TraesCS1D01G371800.1	Wheat	nucleus	34.38	41.38
TraesCS3D01G255400.1	Wheat	nucleus	33.52	41.05
TraesCS1D01G371900.1	Wheat	nucleus	32.09	39.86
TraesCS1D01G371700.1	Wheat	nucleus	33.24	39.59
TraesCS1D01G371400.1	Wheat	nucleus	33.24	38.28
TraesCS1D01G371500.1	Wheat	nucleus	32.66	38.26
TraesCS3D01G251600.1	Wheat	nucleus	27.51	32.76
TraesCS2D01G366800.1	Wheat	nucleus	25.79	32.61
TraesCS2D01G367000.1	Wheat	nucleus	26.07	32.38
TraesCS2D01G366900.1	Wheat	nucleus	25.79	31.8
TraesCS1D01G084400.1	Wheat	nucleus	38.11	31.0
TraesCS6D01G219300.1	Wheat	nucleus	25.21	29.83
TraesCS3D01G094500.1	Wheat	nucleus	23.5	28.77
TraesCS6D01G043600.1	Wheat	nucleus	25.5	28.16
TraesCS2D01G234000.1	Wheat	nucleus	30.09	27.49
TraesCS7D01G300000.1	Wheat	nucleus	25.79	26.24
TraesCS5D01G113300.1	Wheat	nucleus	27.51	24.68

Protein Annotations

EnsemblPlants:TraesCS2D01G158200.1	EnsemblPlantsGene:TraesCS2D01G158200	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	ncoils:Coil
PANTHER:PTHR10641	PANTHER:PTHR10641:SF601	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	TIGR:cd00167	MapMan:15.5.2.1	:	:	:

Description

No Description!

Coordinates

chr2D:-:101871945..101873227

Molecular Weight (calculated)

37127.2 Da

IEP (calculated)

6.725

GRAVY (calculated)

-0.433

Length

349 amino acids

Sequence
(BLAST)

001: MSKRPGGMKK RLKRGLWSPE EDEKLMNHIA KYGNGCWSSV PKIAGLERCG KSCRLRWINY LRPDLKRGAF SQEEEDLIIH LHSILGNKWS QIAAQLPGRT
101: DNEVKNFWNS FIKKKLRQRG IDPATHKPLA PAGAPAAATP VSRSAVFSEA ELILSSPVGG PHMPPLVSAE SYVYSRGSMD GAGGVVGGCS DDGSLSSLSG
201: YNNNQTADFA GYLDADALHG GVIPSVSSSS TLNSMAGVSP GGAANTNATT DELCCNNNPS NSGSGFESST TQSSSNHHLP WLELGSISSC ADHYGAALDE
301: LKWSDYVFDG GYPQYHQQGQ CIYGDSKAAA DAAAGQFDAH GLGINWCLN

Best Arabidopsis Sequence Match ( AT1G57560.1 )
(BLAST)

001: MKRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLERCG KSCRLRWINY LRPDLKRGAF SSEEQNLIVE LHAVLGNRWS QIAARLPGRT
101: DNEIKNLWNS CIKKKLMKKG IDPITHKPLS EVGKETNRSD NNNSTSFSSE TNQDLFVKKT SDFAEYSAFQ KEESNSVSLR NSLSSMIPTQ FNIDDGSVSN
201: AGFDTQVCVK PSIILLPPPN NTSSTVSGQD HVNVSEPNWE SNSGTTSHLN NPGMEEMKWS EEYLNESLFS TQVYVKSETD FNSNIAFPWS QSQACDVFPK
301: DLQRMAFSFG GQTL

Arabidopsis Description

AtMYB50At1g57560 [Source:UniProtKB/TrEMBL;Acc:Q9C695]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.