Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g077220.2.1 | Tomato | nucleus | 92.86 | 93.56 |
| PGSC0003DMT400055199 | Potato | nucleus | 44.74 | 44.74 |
| PGSC0003DMT400026968 | Potato | nucleus | 40.6 | 42.52 |
| PGSC0003DMT400096970 | Potato | nucleus | 31.58 | 42.42 |
| PGSC0003DMT400067540 | Potato | nucleus | 38.72 | 37.45 |
| PGSC0003DMT400032546 | Potato | nucleus | 38.72 | 36.79 |
| PGSC0003DMT400078329 | Potato | nucleus | 28.57 | 35.35 |
| PGSC0003DMT400062081 | Potato | nucleus | 40.23 | 35.08 |
| PGSC0003DMT400066838 | Potato | nucleus | 37.22 | 34.38 |
| PGSC0003DMT400016146 | Potato | nucleus | 42.86 | 30.56 |
| PGSC0003DMT400060951 | Potato | nucleus | 37.97 | 28.77 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102602414 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:Leu_zip_homeo | UniProt:M1A1J3 | PFAM:PF00046 | PFAM:PF02183 | EnsemblPlantsGene:PGSC0003DMG400004932 | PGSC:PGSC0003DMG400004932 |
| EnsemblPlants:PGSC0003DMT400012615 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF486 | SMART:SM00340 |
| SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000296B24D | RefSeq:XP_006356814.1 | SEG:seg | : |
Description
Homeobox-leucine zipper protein HAT22 [Source:PGSC_GENE;Acc:PGSC0003DMG400004932]
Coordinates
chr4:-:66219080..66221346
Molecular Weight (calculated)
30466.5 Da
IEP (calculated)
7.838
GRAVY (calculated)
-0.964
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MMCNTRLSLS LGLSSSPPHQ NNNEEKLSTN DDNQEKLTLC LSTSSEFTNN YDNNRINPQL LGGVNSSVSS FSNTSSVKRE RDASSFEEEV ENLETKRVLL
101: ISPKGLVDHN DDDEDVHDYG TRKKLRLTKE QSDVLEDSFK EHTTLNSKQK RDLARRLSLR PRQVEVWFQN RRARTKLKQT EVDCEILRKC YEDLKDENRR
201: LNKEIQELKS LKKSQSFRVQ LSAATLSMCP SCERTYGGAA TDNSTKISFS IGDQKPHFYG IPSQIH
101: ISPKGLVDHN DDDEDVHDYG TRKKLRLTKE QSDVLEDSFK EHTTLNSKQK RDLARRLSLR PRQVEVWFQN RRARTKLKQT EVDCEILRKC YEDLKDENRR
201: LNKEIQELKS LKKSQSFRVQ LSAATLSMCP SCERTYGGAA TDNSTKISFS IGDQKPHFYG IPSQIH
001: MGFDDTCNTG LVLGLGPSPI PNNYNSTIRQ SSVYKLEPSL TLCLSGDPSV TVVTGADQLC RQTSSHSGVS SFSSGRVVKR ERDGGEESPE EEEMTERVIS
101: DYHEDEEGIS ARKKLRLTKQ QSALLEESFK DHSTLNPKQK QVLARQLNLR PRQVEVWFQN RRARTKLKQT EVDCEFLKKC CETLADENIR LQKEIQELKT
201: LKLTQPFYMH MPASTLTKCP SCERIGGGGG GNGGGGGGSG ATAVIVDGST AKGAFSISSK PHFFNPFTNP SAAC
101: DYHEDEEGIS ARKKLRLTKQ QSALLEESFK DHSTLNPKQK QVLARQLNLR PRQVEVWFQN RRARTKLKQT EVDCEFLKKC CETLADENIR LQKEIQELKT
201: LKLTQPFYMH MPASTLTKCP SCERIGGGGG GNGGGGGGSG ATAVIVDGST AKGAFSISSK PHFFNPFTNP SAAC
Arabidopsis Description
HAT9HAT9 [Source:UniProtKB/TrEMBL;Acc:A0A178VZE8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.