Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 3
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g008580.1.1 | Tomato | nucleus | 9.09 | 4.57 |
| Solyc01g044340.2.1 | Tomato | cytosol | 2.02 | 4.38 |
| Solyc01g005650.1.1 | Tomato | nucleus | 4.38 | 2.49 |
| Solyc06g073340.2.1 | Tomato | nucleus | 4.38 | 2.36 |
| Solyc01g109280.2.1 | Tomato | nucleus | 3.7 | 1.86 |
| Solyc04g079780.2.1 | Tomato | cytosol | 0.67 | 0.38 |
| Solyc12g089000.1.1 | Tomato | nucleus | 0.67 | 0.37 |
Protein Annotations
| EnsemblPlants:Solyc01g044350.2.1 | EnsemblPlantsGene:Solyc01g044350.2 | Gene3D:2.20.28.140 | Gene3D:4.10.1060.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0046872 | InterPro:IPR001876 | InterPro:Znf_RanBP2 | InterPro:Znf_RanBP2_sf | PFAM:PF00641 | PFscan:PS50199 |
| ScanProsite:PS01358 | SEG:seg | SMART:SM00547 | SUPFAM:SSF90209 | UniParc:UPI0002763336 | UniProt:K4AVB6 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:43255687..43259371
Molecular Weight (calculated)
31515.2 Da
IEP (calculated)
9.207
GRAVY (calculated)
-0.432
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVKGRAEKI MTLMRTRNGK QPSTNSTASS KHILVPGGGH TARANNLDIR EDNTVRTSKS PFEAWGVKFM ESKEKPVATR SFTLGPQFLQ RAGVNSTTSS
101: SNLQLAGGRK LINVGGGSVK NLANAHVDGS DKLTLSKTPH VPGSDNLTVS KTPHMAGMSS TTSSSNLLLA GGRKLMNIEA GSAKNLASIH VDGSNNLTMS
201: RTPHVAGSNN LTLSKTPHVL DDNDLGEASS ATGASLTQKF IADFEGWACD SCTFLNADST TTCLMCSEDA SGSWECEKCT FLNKKHASTC QICEHRK
101: SNLQLAGGRK LINVGGGSVK NLANAHVDGS DKLTLSKTPH VPGSDNLTVS KTPHMAGMSS TTSSSNLLLA GGRKLMNIEA GSAKNLASIH VDGSNNLTMS
201: RTPHVAGSNN LTLSKTPHVL DDNDLGEASS ATGASLTQKF IADFEGWACD SCTFLNADST TTCLMCSEDA SGSWECEKCT FLNKKHASTC QICEHRK
001: MSTTIRFLRI VTSRAMSSSW SCNKCTFLNS ASQKLNCMIC LAPVSLPSLS PPPPSLSISA NDEAKWACKA CTFLNTYKNS ICDVCGTRSP TSSLLGFQDL
101: TDSGLESNDA DSSVGSVFFP LRRCIKRKAM DDDVVEVDGA SVVCSESQGV MKKNKEIETK GVASDSGTPL TCLKILSYNV WFREDLELNL RMRAIGHLIQ
201: LHSPHLICFQ EVTPEIYDIF RKSNWWKAYS CSVSVDVAVS RGYYCMLLSK LGVKSFSSKS FGNSIMGREL SIAEVEVPGR KPLVFATSHL ESPCPGPPKW
301: DQMFSRERVE QAKEAIEILR PNANVIFGGD MNWCDKLDGK FPLPDKWVDV WEVLKPGDLG FTYDTKANPM LSGNRALQKR LDRILCRLDD YKLGGIEMVG
401: KEAIPGLSYV KEKKVRGDIK KLELPVLPSD HFGLLVTLSP K
101: TDSGLESNDA DSSVGSVFFP LRRCIKRKAM DDDVVEVDGA SVVCSESQGV MKKNKEIETK GVASDSGTPL TCLKILSYNV WFREDLELNL RMRAIGHLIQ
201: LHSPHLICFQ EVTPEIYDIF RKSNWWKAYS CSVSVDVAVS RGYYCMLLSK LGVKSFSSKS FGNSIMGREL SIAEVEVPGR KPLVFATSHL ESPCPGPPKW
301: DQMFSRERVE QAKEAIEILR PNANVIFGGD MNWCDKLDGK FPLPDKWVDV WEVLKPGDLG FTYDTKANPM LSGNRALQKR LDRILCRLDD YKLGGIEMVG
401: KEAIPGLSYV KEKKVRGDIK KLELPVLPSD HFGLLVTLSP K
Arabidopsis Description
At1g11800/F25C20_3 [Source:UniProtKB/TrEMBL;Acc:Q9SA95]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.