Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069483 | Potato | nucleus | 96.91 | 96.04 |
| Bra021726.1-P | Field mustard | nucleus | 67.27 | 73.71 |
| CDX84781 | Canola | nucleus | 72.55 | 72.02 |
| Bra022845.1-P | Field mustard | nucleus | 72.36 | 71.97 |
| CDY19083 | Canola | nucleus | 71.64 | 70.99 |
| KRH23186 | Soybean | nucleus | 76.0 | 70.97 |
| CDY15392 | Canola | nucleus | 71.82 | 70.92 |
| KRH10154 | Soybean | nucleus | 75.64 | 70.63 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 75.27 | 70.53 |
| AT2G31510.1 | Thale cress | nucleus | 72.0 | 70.46 |
| CDY23938 | Canola | nucleus | 71.27 | 70.38 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 70.91 | 69.64 |
| Solyc11g008580.1.1 | Tomato | nucleus | 74.55 | 69.37 |
| Os04t0492100-01 | Rice | nucleus | 59.45 | 69.28 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 69.27 | 69.02 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 73.45 | 68.82 |
| KRH29654 | Soybean | nucleus | 72.73 | 68.26 |
| CDY10162 | Canola | nucleus | 68.73 | 68.11 |
| KRH24651 | Soybean | nucleus | 72.55 | 68.09 |
| EES11042 | Sorghum | nucleus | 72.36 | 67.57 |
| CDY47704 | Canola | nucleus | 68.55 | 67.56 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 72.0 | 67.46 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 72.18 | 67.4 |
| Zm00001d025750_P011 | Maize | extracellular | 72.18 | 67.4 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 72.18 | 67.4 |
| Zm00001d003207_P001 | Maize | nucleus | 72.0 | 67.23 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 72.0 | 67.23 |
| Bra015463.1-P | Field mustard | nucleus | 68.18 | 67.2 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 71.82 | 67.06 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 71.45 | 66.95 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 71.45 | 66.72 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 71.45 | 66.72 |
| CDX86547 | Canola | nucleus | 66.91 | 66.43 |
| CDY63791 | Canola | nucleus | 66.73 | 66.37 |
| CDY34490 | Canola | cytosol | 14.36 | 64.23 |
| AT1G05890.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 67.27 | 62.29 |
| CDX79440 | Canola | cytosol | 19.27 | 61.99 |
| CDX70415 | Canola | nucleus | 58.18 | 60.95 |
| CDX78438 | Canola | nucleus | 53.45 | 59.39 |
| Bra006112.1-P | Field mustard | nucleus | 57.64 | 59.36 |
| CDY68345 | Canola | cytosol | 46.55 | 58.31 |
| CDY68344 | Canola | nucleus | 52.73 | 58.23 |
| Bra021742.1-P | Field mustard | nucleus | 52.36 | 57.83 |
| CDX91196 | Canola | nucleus | 52.91 | 57.17 |
| Bra023338.1-P | Field mustard | nucleus | 57.09 | 56.88 |
| CDY61443 | Canola | nucleus | 55.09 | 56.11 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 66.91 | 55.01 |
| Bra005642.1-P | Field mustard | nucleus | 50.91 | 54.9 |
| CDX84759 | Canola | nucleus | 51.45 | 54.32 |
| Bra022865.1-P | Field mustard | nucleus | 51.45 | 54.32 |
| AT2G31780.1 | Thale cress | nucleus | 43.45 | 53.95 |
| CDY42068 | Canola | nucleus | 44.0 | 52.95 |
| AT2G31760.1 | Thale cress | nucleus | 49.27 | 52.72 |
| CDY15373 | Canola | nucleus | 52.36 | 52.65 |
| CDX79439 | Canola | nucleus | 30.18 | 50.76 |
| CDY15374 | Canola | nucleus | 52.55 | 50.44 |
| AT2G31770.1 | Thale cress | nucleus | 49.45 | 50.09 |
| Zm00001d046141_P001 | Maize | cytosol | 25.09 | 48.59 |
| Solyc01g005650.1.1 | Tomato | nucleus | 45.27 | 47.7 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 25.27 | 47.28 |
| Solyc01g044340.2.1 | Tomato | cytosol | 10.0 | 40.15 |
| Solyc04g079780.2.1 | Tomato | cytosol | 27.82 | 29.31 |
| Solyc12g089000.1.1 | Tomato | nucleus | 27.27 | 27.93 |
| Solyc01g109280.2.1 | Tomato | nucleus | 27.82 | 25.93 |
| Solyc01g044350.2.1 | Tomato | mitochondrion | 2.36 | 4.38 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | InterPro:E3_UB_ligase_RBR | GO:GO:0000151 | GO:GO:0000209 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031624 |
| GO:GO:0032436 | GO:GO:0042787 | GO:GO:0046872 | GO:GO:0061630 | InterPro:IBR_dom | InterPro:IPR001841 |
| InterPro:IPR013083 | UniProt:K4C953 | PFAM:PF01485 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 |
| SMART:SM00647 | SUPFAM:SSF57850 | EnsemblPlantsGene:Solyc06g073340.2 | EnsemblPlants:Solyc06g073340.2.1 | UniParc:UPI0002765DBC | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:45191873..45199573
Molecular Weight (calculated)
62546.7 Da
IEP (calculated)
4.742
GRAVY (calculated)
-0.697
Length
550 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSEDDMHDA NDMESVDEDF YSDGDAADSD ADVADYDFMG NETDDSDEQA VSRMQKNYTV LKEEDIRQRQ EEDMTTISTL LSISREAACI LLRRYNWSVN
101: KVHEEWFADE ERVRKSAGLL EKPVVSLSRV IDVVCGICFD NFLPADIISL GCGHPFCTSC WKAYITTSIN DGPGCLTLRC PDPSCDVAIG QDMIDTLTSG
201: EDKEKYYRYL LRSYIEDNRK TKWCPAPGCD SAIEYDLGSG SYDVTCSCSF SFCWNCTEEA HRPVDCDTVS KWILKNSAES ENMNWILANS KPCPKCKRPI
301: EKNQGCMHMT CTPPCKFEFC WLCLGAWSDH GERTGGFYAC NRYESAKQEG VYDESERRRE MAKNSLERYT HYYERWATNQ SSRQKALADL HQMQSVHLEK
401: LSELQSQPES QLKFIIDSWQ QIVECRRVLK WTYAYGYYLP EHEKAKRQFF EYVQGEAEAG LERLHQCAEK ELQTYLNAAG PTKDFNDFRT KLAGLTSVTR
501: NYFENLVRAL ENGLADVDSQ GACSKAPSSK NTTGSSKGKG GGRGKNSTKT
101: KVHEEWFADE ERVRKSAGLL EKPVVSLSRV IDVVCGICFD NFLPADIISL GCGHPFCTSC WKAYITTSIN DGPGCLTLRC PDPSCDVAIG QDMIDTLTSG
201: EDKEKYYRYL LRSYIEDNRK TKWCPAPGCD SAIEYDLGSG SYDVTCSCSF SFCWNCTEEA HRPVDCDTVS KWILKNSAES ENMNWILANS KPCPKCKRPI
301: EKNQGCMHMT CTPPCKFEFC WLCLGAWSDH GERTGGFYAC NRYESAKQEG VYDESERRRE MAKNSLERYT HYYERWATNQ SSRQKALADL HQMQSVHLEK
401: LSELQSQPES QLKFIIDSWQ QIVECRRVLK WTYAYGYYLP EHEKAKRQFF EYVQGEAEAG LERLHQCAEK ELQTYLNAAG PTKDFNDFRT KLAGLTSVTR
501: NYFENLVRAL ENGLADVDSQ GACSKAPSSK NTTGSSKGKG GGRGKNSTKT
001: MDSEEDMLDA HDMESGEDDF YSGGTDDCND SDDGEPDYGF VEEDADDSAM IASHRSQKNF CVLREEDIRR HQMDNIERVS VVLSITEVEA SILLRHFHWS
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
Arabidopsis Description
ARI7Probable E3 ubiquitin-protein ligase ARI7 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.