Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0492100-01 | Rice | nucleus | 65.02 | 92.16 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 80.27 | 91.17 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 80.27 | 91.17 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 80.12 | 91.0 |
| EES11042 | Sorghum | nucleus | 74.29 | 84.38 |
| Zm00001d025750_P011 | Maize | extracellular | 74.29 | 84.38 |
| Zm00001d003207_P001 | Maize | nucleus | 73.84 | 83.87 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 69.51 | 78.95 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 61.73 | 73.75 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 64.57 | 73.59 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 60.54 | 73.37 |
| Bra021726.1-P | Field mustard | nucleus | 54.86 | 73.11 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 62.78 | 71.55 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 61.29 | 69.85 |
| KRH29654 | Soybean | nucleus | 59.79 | 68.26 |
| KRH23186 | Soybean | nucleus | 60.09 | 68.25 |
| KRH10154 | Soybean | nucleus | 59.94 | 68.08 |
| KRH24651 | Soybean | nucleus | 59.34 | 67.75 |
| Solyc06g073340.2.1 | Tomato | nucleus | 55.01 | 66.91 |
| CDY15392 | Canola | nucleus | 55.31 | 66.43 |
| Bra022845.1-P | Field mustard | nucleus | 54.86 | 66.37 |
| CDY19083 | Canola | nucleus | 55.01 | 66.31 |
| CDX84781 | Canola | nucleus | 54.86 | 66.25 |
| PGSC0003DMT400069483 | Potato | nucleus | 54.71 | 65.95 |
| AT2G31510.1 | Thale cress | nucleus | 55.31 | 65.84 |
| CDY23938 | Canola | nucleus | 54.41 | 65.35 |
| CDY47704 | Canola | nucleus | 53.06 | 63.62 |
| Bra015463.1-P | Field mustard | nucleus | 53.06 | 63.62 |
| CDY10162 | Canola | nucleus | 52.32 | 63.06 |
| HORVU7Hr1G056020.3 | Barley | cytosol | 26.46 | 62.77 |
| CDX86547 | Canola | nucleus | 51.87 | 62.64 |
| CDY63791 | Canola | nucleus | 51.42 | 62.21 |
| CDY34490 | Canola | cytosol | 11.36 | 61.79 |
| CDX79440 | Canola | cytosol | 15.55 | 60.82 |
| Zm00001d046141_P001 | Maize | cytosol | 25.11 | 59.15 |
| AT1G05890.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 51.72 | 58.25 |
| CDY68345 | Canola | cytosol | 38.12 | 58.09 |
| HORVU5Hr1G078470.2 | Barley | nucleus | 47.09 | 56.45 |
| CDX70415 | Canola | nucleus | 43.95 | 56.0 |
| Bra006112.1-P | Field mustard | nucleus | 44.1 | 55.24 |
| CDY68344 | Canola | nucleus | 41.11 | 55.22 |
| Bra021742.1-P | Field mustard | nucleus | 40.81 | 54.82 |
| CDX78438 | Canola | nucleus | 40.21 | 54.34 |
| Bra023338.1-P | Field mustard | nucleus | 44.1 | 53.44 |
| CDX91196 | Canola | nucleus | 40.66 | 53.44 |
| CDY61443 | Canola | nucleus | 42.6 | 52.78 |
| AT2G31760.1 | Thale cress | nucleus | 39.76 | 51.75 |
| AT2G31780.1 | Thale cress | nucleus | 34.23 | 51.69 |
| Bra005642.1-P | Field mustard | nucleus | 38.71 | 50.78 |
| AT2G31770.1 | Thale cress | nucleus | 41.11 | 50.64 |
| CDX84759 | Canola | nucleus | 39.31 | 50.48 |
| Bra022865.1-P | Field mustard | nucleus | 39.31 | 50.48 |
| CDY15373 | Canola | nucleus | 41.26 | 50.46 |
| HORVU7Hr1G056040.5 | Barley | nucleus, plastid | 49.78 | 50.15 |
| CDY42068 | Canola | nucleus | 33.18 | 48.58 |
| CDY15374 | Canola | nucleus | 41.55 | 48.52 |
| CDX79439 | Canola | nucleus | 22.27 | 45.57 |
| HORVU5Hr1G089940.1 | Barley | cytosol | 21.67 | 43.54 |
| HORVU3Hr1G049680.1 | Barley | nucleus | 23.62 | 43.53 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 18.39 | 41.84 |
| HORVU3Hr1G019640.1 | Barley | cytosol, peroxisome, plastid | 13.15 | 41.31 |
| HORVU5Hr1G089020.2 | Barley | nucleus | 33.33 | 36.8 |
| HORVU4Hr1G066180.1 | Barley | nucleus | 21.67 | 23.39 |
| HORVU4Hr1G011770.1 | Barley | nucleus | 17.49 | 21.79 |
| HORVU4Hr1G011910.1 | Barley | cytosol, plastid | 18.09 | 19.77 |
| HORVU1Hr1G018020.1 | Barley | cytosol | 4.93 | 17.93 |
| HORVU7Hr1G068450.2 | Barley | nucleus | 5.53 | 14.45 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | UniProt:A0A287IQU1 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:HORVU2Hr1G085060 |
| EnsemblPlants:HORVU2Hr1G085060.3 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR001876 | InterPro:IPR013083 | PFAM:PF01485 |
| ScanProsite:PS01358 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 | SMART:SM00547 | SMART:SM00647 |
| SUPFAM:SSF57850 | SUPFAM:SSF90209 | UniParc:UPI000B47B775 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RanBP2 |
| InterPro:Znf_RanBP2_sf | SEG:seg | : | : | : | : |
Description
RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A287IQU1]
Coordinates
chrchr2H:-:615044902..615053859
Molecular Weight (calculated)
61586.0 Da
IEP (calculated)
6.957
GRAVY (calculated)
-0.567
Length
669 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXPELL SLRQQQNYCI LSEAGIKQRQ EDDINRVSTV LSISKSEACA LLRSYNWSVS KVHDEWFVDE ERVRKVVGFP
201: EKRIEMPNDR ELACGICFEN CPHASMSAAA CGHPFCSVCW RGYISTAIND GPGCLMLRCP DPSCAAAVGQ DMINSLANEE DKEKYGRYLR RSYIEDNRKT
301: KWCPAPGCEY AVEFVVGSGS YDVNCNCSYG FCWNCTEEAH RPVDCATVSK WILKNSAESE NMNWILANSK PCPKCKRPIE KNQGCMHITC TPPCKFEFCW
401: LCLGSWSEHG ERTGGFYACN RYEAARQEGA YDESERRREM AKNSLERYTH YYERWAANQS SRQKALGDLQ SLQNDKLEKL SDIQSQPESQ LKFIIEAWLQ
501: IVECRRVLKW TYAYGYYLPE QEHAKRQFFE YLQGEAESGL ERLHQCAEKE LQIYLEAESP SKDFNDFRTK LAGLTSVTRN YFENLVRALE TGLNDVGPST
601: SQSTGNKNTT SKSLGGKSKS GKNRTSGAGS KSGSSSRGVD DSNIWTCDQC TYVNPRSAKA CQACDHQHR
101: XXXXXXXXXX XXXXXXXXXX XXXXXXPELL SLRQQQNYCI LSEAGIKQRQ EDDINRVSTV LSISKSEACA LLRSYNWSVS KVHDEWFVDE ERVRKVVGFP
201: EKRIEMPNDR ELACGICFEN CPHASMSAAA CGHPFCSVCW RGYISTAIND GPGCLMLRCP DPSCAAAVGQ DMINSLANEE DKEKYGRYLR RSYIEDNRKT
301: KWCPAPGCEY AVEFVVGSGS YDVNCNCSYG FCWNCTEEAH RPVDCATVSK WILKNSAESE NMNWILANSK PCPKCKRPIE KNQGCMHITC TPPCKFEFCW
401: LCLGSWSEHG ERTGGFYACN RYEAARQEGA YDESERRREM AKNSLERYTH YYERWAANQS SRQKALGDLQ SLQNDKLEKL SDIQSQPESQ LKFIIEAWLQ
501: IVECRRVLKW TYAYGYYLPE QEHAKRQFFE YLQGEAESGL ERLHQCAEKE LQIYLEAESP SKDFNDFRTK LAGLTSVTRN YFENLVRALE TGLNDVGPST
601: SQSTGNKNTT SKSLGGKSKS GKNRTSGAGS KSGSSSRGVD DSNIWTCDQC TYVNPRSAKA CQACDHQHR
001: MEADDDFYSG TENYSDYADS DEDDADGEYE FVDDAADDSD DLIFRRRQQN YSVLSEADIC KLQEDDISRI STVLSISRNS SAILLRHYNW CVSRVHDEWF
101: ADEEKVRDAV GLLEKPVVDF PTDGELDCGI CFETFLSDKL HAAACGHPFC DSCWEGYITT AINDGPGCLT LRCPDPSCRA AVGQDMINLL APDKDKQKYT
201: SYFVRSYVED NRKTKWCPAP GCDYAVNFVV GSGNYDVNCR CCYSFCWNCA EEAHRPVDCD TVSKWVLKNS AESENMNWIL ANSKPCPKCK RPIEKNQGCM
301: HITCTPPCKF EFCWLCLGAW TEHGEKTGGF YACNRYEAAK QDGIYDETEK RREMAKNSLE RYTHYYERWA TNQSSRQKAL LDLKKMQTDD IEKLSDIQCQ
401: PESQLKFIIE AWLQIVECRR VLKWTYAYGF YIPDQEHGKR VFFEYLQGEA ESGLERLHQC AEKELLPYLD AKGPSEDFNE FRTKLAGLTS VTKNYFENLV
501: RALENGLSDV NSHDAYDRTS SSKSLGGKTK GSSSKASSSD SSHWPCEYCT YVNPRSTTIC QMCEHGR
101: ADEEKVRDAV GLLEKPVVDF PTDGELDCGI CFETFLSDKL HAAACGHPFC DSCWEGYITT AINDGPGCLT LRCPDPSCRA AVGQDMINLL APDKDKQKYT
201: SYFVRSYVED NRKTKWCPAP GCDYAVNFVV GSGNYDVNCR CCYSFCWNCA EEAHRPVDCD TVSKWVLKNS AESENMNWIL ANSKPCPKCK RPIEKNQGCM
301: HITCTPPCKF EFCWLCLGAW TEHGEKTGGF YACNRYEAAK QDGIYDETEK RREMAKNSLE RYTHYYERWA TNQSSRQKAL LDLKKMQTDD IEKLSDIQCQ
401: PESQLKFIIE AWLQIVECRR VLKWTYAYGF YIPDQEHGKR VFFEYLQGEA ESGLERLHQC AEKELLPYLD AKGPSEDFNE FRTKLAGLTS VTKNYFENLV
501: RALENGLSDV NSHDAYDRTS SSKSLGGKTK GSSSKASSSD SSHWPCEYCT YVNPRSTTIC QMCEHGR
Arabidopsis Description
ARI8ATARI8 [Source:UniProtKB/TrEMBL;Acc:A0A178WLP2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.