Factsheet for Bra005642.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42068	Canola	nucleus	86.27	96.28
CDY34512	Canola	cytosol, nucleus, plastid	46.08	79.93
Bra021742.1-P	Field mustard	nucleus	68.24	69.88
Bra022865.1-P	Field mustard	nucleus	69.22	67.75
AT2G31780.1	Thale cress	nucleus	53.92	62.08
AT2G31760.1	Thale cress	nucleus	60.98	60.51
AT2G31770.1	Thale cress	nucleus	61.37	57.64
Bra021726.1-P	Field mustard	nucleus	54.71	55.58
Bra022845.1-P	Field mustard	nucleus	59.22	54.61
Bra015463.1-P	Field mustard	nucleus	57.84	52.87
PGSC0003DMT400069483	Potato	nucleus	55.88	51.35
Bra006112.1-P	Field mustard	nucleus	53.53	51.12
Solyc06g073340.2.1	Tomato	nucleus	54.9	50.91
Bra023338.1-P	Field mustard	nucleus	54.9	50.72
GSMUA_Achr9P07970_001	Banana	nucleus	53.14	49.09
GSMUA_Achr6P28580_001	Banana	nucleus	53.53	48.75
VIT_05s0102g00160.t01	Wine grape	nucleus	55.69	48.38
Bra022479.1-P	Field mustard	nucleus	52.94	47.87
KRH23186	Soybean	nucleus	55.1	47.71
KRH10154	Soybean	nucleus	54.71	47.37
Os04t0492100-01	Rice	nucleus	43.73	47.25
EES11042	Sorghum	nucleus	54.51	47.2
GSMUA_Achr8P28870_001	Banana	nucleus	54.31	47.19
KRH29654	Soybean	nucleus	54.12	47.1
KRH24651	Soybean	nucleus	54.12	47.1
Zm00001d003207_P001	Maize	nucleus	54.31	47.03
HORVU6Hr1G055260.4	Barley	nucleus	54.12	46.86
TraesCS6D01G198600.5	Wheat	nucleus	53.92	46.69
TraesCS6B01G245900.2	Wheat	nucleus	53.73	46.68
TraesCS6A01G216900.1	Wheat	nucleus	53.73	46.52
Zm00001d025750_P011	Maize	extracellular	53.73	46.52
TraesCS2A01G349600.1	Wheat	nucleus	53.53	46.35
TraesCS2D01G348000.2	Wheat	nucleus	53.53	46.35
TraesCS2B01G368000.2	Wheat	nucleus	53.33	46.18
GSMUA_Achr3P16920_001	Banana	nucleus	53.14	46.17
HORVU2Hr1G085060.3	Barley	cytosol	50.78	38.71
Zm00001d046141_P001	Maize	cytosol	21.37	38.38
Bra015460.1-P	Field mustard	nucleus	36.86	36.15
Bra018221.1-P	Field mustard	cytosol	26.27	29.84
Bra038658.1-P	Field mustard	nucleus	21.37	25.23
Bra039068.1-P	Field mustard	nucleus	25.1	24.43
Bra038659.1-P	Field mustard	nucleus	23.92	24.35
Bra028646.1-P	Field mustard	nucleus	22.55	24.21
Bra033024.1-P	Field mustard	nucleus	23.53	22.81
Bra011524.1-P	Field mustard	nucleus	26.27	22.67
Bra001960.1-P	Field mustard	nucleus	25.69	22.51
Bra038276.1-P	Field mustard	cytosol	26.08	22.06
Bra029204.1-P	Field mustard	nucleus	18.63	21.35
Bra009365.1-P	Field mustard	cytosol	25.49	19.43
Bra038660.1-P	Field mustard	cytosol	6.27	17.3

Protein Annotations

Gene3D:1.20.120.1750	MapMan:19.2.2.1.5.4.1	Gene3D:3.30.40.10	EnsemblPlantsGene:Bra005642	EnsemblPlants:Bra005642.1	EnsemblPlants:Bra005642.1-P
InterPro:E3_UB_ligase_RBR	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
GO:GO:0046872	InterPro:IBR_dom	InterPro:IPR001841	InterPro:IPR013083	UniProt:M4CN54	PFAM:PF01485
ScanProsite:PS00518	PFscan:PS50089	PANTHER:PTHR11685	PANTHER:PTHR11685:SF177	SMART:SM00647	SUPFAM:SSF57850
UniParc:UPI00025478D6	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	SEG:seg	:

Description

AT2G31760 (E=1e-176) | zinc finger protein-related

Coordinates

chrA05:-:6701754..6703731

Molecular Weight (calculated)

59671.4 Da

IEP (calculated)

5.094

GRAVY (calculated)

-0.649

Length

510 amino acids

Sequence
(BLAST)

001: MDYSDDDGML NIESGEENLY IDHTSEADYG MEEDMHNDST SKRDQISYIV LKEEDIREHQ KTDIKQISTV LSINQVEAII LLLHYQWSSS KVEDEWFTSE
101: ERVRKTVGML KEHMVDLNDQ DVNIGCGICF ESYLRKEIAT VSCGHPYCKT CWTSYITEKI NNGPGCLMIK CPEPSCYAVV GQDMIDKLIT IEEDKEKYCR
201: YFLRSYVKEG KNNIKWCPSP GCVYAVDFGT RNGTENYDVT CLCSYDFCWN CSEDAHRPVN CDMVSKWITK NIKDNESKNM TWILANTKPC PNCNCHIEKN
301: QGCNRMTCPI CNHSFCWICL CPYDGRHTCH NFEGDDETKV KRKRAKRVQR TIDRYMHYYV RWANNQSSRL KAMEDLKELQ AVQLEKLSVK QCFSQTQLQF
401: TVDAWLQIIE CRRVLKWTYA YGYYIPREER TKKQFFEYLQ GEAEVGLERL HHCAEEELQH FVDETDDPST DFDDFRKKLI GLTKVTKTYF ENLVKALEND
501: LADVAVDDSK

Best Arabidopsis Sequence Match ( AT2G31760.1 )
(BLAST)

001: MDYSDDDMID NESGEENNSD GGGNESYNYN AAVDTIILSE KSYVIIKEEE ILKLQRDDIE RVSTILFLSQ VEAIVLLLHY HWCVSKLEDE WFTDEERIRK
101: TVGILKEPVV DVNGTEVDIQ CGICFESYTR KEIASVSCGH PYCKTCWTGY ITTKIEDGPG CLRVKCPEPS CYAVVGQDMI DEVTEKKDKD KYYRYFLRSY
201: VEDGKKMKWC PSPGCECAVE FGESSGYDVA CLCSYRFCWN CSEDAHSPVD CETVSKWIFK NQDESENKNW ILANSKPCPK CKRPIEKSHG CNHMTCSASC
301: GHRFCWICGK SYSDHYACNN YVEDADHDKR TLLQSEIKRY THYYVRWVEN QSSRLKAMSD LEKFQSVQLK QLSDNQCKPK IDLQFIVDAW LQIIECRRVL
401: KWTYAYGYYL DNLAKRPLFE YLQGEAETGL ERLHHCAENE LKQFFIKSED PSDTFNAFRM KLTGLTKVTK TYFDNLVKAL ENGLADVTKS SEESADFLET
501: QKLYDAYISE GCFF

Arabidopsis Description

ARI10Probable E3 ubiquitin-protein ligase ARI10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKC4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.