Factsheet for Bra029204.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31353	Canola	nucleus	98.65	98.65
Bra038660.1-P	Field mustard	cytosol	21.57	51.89
Bra038659.1-P	Field mustard	nucleus	57.75	51.3
Bra038658.1-P	Field mustard	nucleus	48.09	49.54
AT5G63750.1	Thale cress	nucleus	52.81	43.84
AT5G63730.1	Thale cress	cytosol	48.31	42.49
AT5G63760.2	Thale cress	nucleus	43.15	42.48
Bra028646.1-P	Field mustard	nucleus	33.26	31.16
Bra018221.1-P	Field mustard	cytosol	30.56	30.29
Bra009365.1-P	Field mustard	cytosol	35.51	23.62
Bra038276.1-P	Field mustard	cytosol	31.24	23.05
Bra021726.1-P	Field mustard	nucleus	22.92	20.32
Bra006112.1-P	Field mustard	nucleus	24.04	20.04
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	22.47	19.53
Bra022479.1-P	Field mustard	nucleus	24.49	19.33
Bra021742.1-P	Field mustard	nucleus	21.12	18.88
Bra022865.1-P	Field mustard	nucleus	22.02	18.81
KRH24184	Soybean	nucleus	22.02	18.77
Bra005642.1-P	Field mustard	nucleus	21.35	18.63
Bra022845.1-P	Field mustard	nucleus	23.15	18.63
Bra015463.1-P	Field mustard	nucleus	22.7	18.1
Bra023338.1-P	Field mustard	nucleus	22.02	17.75
Bra015460.1-P	Field mustard	nucleus	19.1	16.35
Bra001960.1-P	Field mustard	nucleus	17.75	13.57
Bra039068.1-P	Field mustard	nucleus	15.51	13.17
Bra033024.1-P	Field mustard	nucleus	14.83	12.55
Bra011524.1-P	Field mustard	nucleus	15.96	12.01

Protein Annotations

Gene3D:1.20.120.1750	MapMan:35.1	EnsemblPlantsGene:Bra029204	EnsemblPlants:Bra029204.1	EnsemblPlants:Bra029204.1-P	InterPro:E3_UB_ligase_RBR
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0046872
InterPro:IBR_dom	InterPro:IPR001876	UniProt:M4EK87	PFAM:PF01485	ScanProsite:PS01358	PANTHER:PTHR11685
PANTHER:PTHR11685:SF213	SMART:SM00647	SUPFAM:SSF57850	UniParc:UPI0002545F8B	InterPro:Znf_RanBP2	:

Description

AT5G63730 (E=4e-086) | IBR domain-containing protein

Coordinates

chrA02:-:26550524..26553420

Molecular Weight (calculated)

51023.4 Da

IEP (calculated)

4.925

GRAVY (calculated)

-0.366

Length

445 amino acids

Sequence
(BLAST)

001: MEHDPEREYS FLTRDDLKVK MNKQIDDLSD IFLLSKPAAT VLLMNLHWDS QQVSERLSED KEKLLMRSGL MSSNYGDSFF SVEKNLAMLT LEAKDMHSEY
101: VLRSFLEENK GLTIEQCPAP GCGYFIEFQR DIGFEEYGLN VVCLCGHTFC GRCRLETHGP VTCNNASDWL RDLGKLSESL SVSWIESNTK PCPHCQFPLE
201: VGSRSRLFRF VECLYCSGRF CSECMQTVES HNTADGYYGA CVAPLPPQLM NGPEAVVVTC VDRWEASDVA MVEAKSELES FDESHFTSQE YIRNMREGLM
301: LIVQCRQFLK WSCVYDHVHT EYQASKREYL RFLQDFASTL VQSYSETLKE ETVKDFSATT HEETIYPKWK LANATSSIGN FFFHFSKTLQ DGIDDVKVKS
401: YDNFAGPYWL CDRCTSGNTW LDMRCKMCCG SATPVEKKLR DLSLN

Best Arabidopsis Sequence Match ( AT5G63730.1 )
(BLAST)

001: MEYDGRRPYS VLTRNEITVK MKKQINEISD IFFISNSDAT VLLMYLRWDS LRVSERLGEN KEKLLMDSGL KSVMIDPSPD SSSEISLETD VYEFDGDNDL
101: ISMPFCSHKF DSKYWREYLE KNFYYVEKIQ TTISCPDQDC RSAVGPDTIE KLTVRDQEMY ERYIWRSYIE GNKVLMIKQC PARNCDYVIE FHQENDDDDE
201: YSLNVVCICG HIFCWRCRLE SHRPVSCNKA SDWLCSATMK ISDESFSLYP TKTKTVTCPH CLCSLESDTK MPQFLTCVCR LRFCSRCLRS EEAHKIEAVD
301: SGFCIKTEVG ILCEDRWNVC QKLLEQAKSD LEAFEETNIK KPSDLLREQD IMIIREGLML IVQCRRVLKW CCVYDYFHTE YENSKEYLRY LQGNAIATLQ
401: SYSNTLQEQK DIVLAAATYE ECTFFRHTIP TATSNIGNYF YDFMKTLQDG LVDVKVKSYN GGTGPFWYCD RCTYANTWED NECEMCYDDS ASLVGEISDL
501: FLNKVS

Arabidopsis Description

ARI14Probable E3 ubiquitin-protein ligase ARI14 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFP1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.