Factsheet for Bra039068.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20037	Canola	nucleus	99.43	99.43
Bra033024.1-P	Field mustard	nucleus	71.76	71.48
AT3G27710.1	Thale cress	nucleus	62.98	61.45
Bra011524.1-P	Field mustard	nucleus	60.69	53.81
AT3G27720.1	Thale cress	nucleus	50.57	53.75
Bra001960.1-P	Field mustard	nucleus	59.35	53.44
VIT_18s0001g11740.t01	Wine grape	cytosol	54.58	51.53
KRH24517	Soybean	nucleus	55.73	50.34
KRH29521	Soybean	nucleus	55.34	50.0
Solyc04g079780.2.1	Tomato	cytosol	49.81	50.0
PGSC0003DMT400043486	Potato	cytosol	49.43	49.71
PGSC0003DMT400064832	Potato	nucleus	54.96	48.81
VIT_03s0063g02000.t01	Wine grape	nucleus	54.77	48.73
Solyc01g109280.2.1	Tomato	nucleus	54.77	48.64
Solyc12g089000.1.1	Tomato	nucleus	49.81	48.6
PGSC0003DMT400039948	Potato	nucleus	50.0	48.25
GSMUA_Achr5P01850_001	Banana	nucleus	46.18	44.9
Os03t0233500-01	Rice	nucleus	51.91	44.44
EER92613	Sorghum	nucleus	51.15	44.37
TraesCS4A01G061500.1	Wheat	nucleus	52.1	44.03
TraesCS4B01G236900.1	Wheat	nucleus	51.72	43.71
TraesCS4D01G238400.2	Wheat	nucleus	51.72	43.71
HORVU4Hr1G066180.1	Barley	nucleus	51.72	43.71
GSMUA_Achr6P23120_001	Banana	nucleus	52.67	42.92
Zm00001d028285_P003	Maize	nucleus	50.57	42.74
TraesCS4D01G070400.1	Wheat	nucleus	40.46	39.7
TraesCS4B01G071700.1	Wheat	nucleus	40.84	39.56
TraesCS4A01G243200.1	Wheat	nucleus	40.08	38.32
TraesCS4B01G071800.1	Wheat	nucleus	39.5	37.7
TraesCS4D01G070600.1	Wheat	nucleus	38.55	37.55
Os03t0625800-01	Rice	cytosol	38.55	37.41
HORVU1Hr1G018020.1	Barley	cytosol	12.98	36.96
EER93787	Sorghum	nucleus	37.4	36.64
EER93790	Sorghum	nucleus	37.79	36.53
Zm00001d013716_P002	Maize	nucleus	37.21	36.52
TraesCS4D01G069600.1	Wheat	nucleus	36.26	35.58
HORVU4Hr1G011770.1	Barley	nucleus	36.26	35.38
Os03t0625933-00	Rice	nucleus	22.14	35.26
TraesCS4A01G244200.1	Wheat	nucleus	35.88	35.07
Zm00001d048017_P003	Maize	nucleus	50.76	34.77
TraesCS4B01G070800.1	Wheat	nucleus	35.31	34.51
HORVU4Hr1G011910.1	Barley	cytosol, plastid	39.31	33.66
Os03t0626100-01	Rice	nucleus	35.69	32.81
HORVU7Hr1G068450.2	Barley	nucleus	15.65	32.03
Bra021742.1-P	Field mustard	nucleus	25.38	26.71
Bra021726.1-P	Field mustard	nucleus	24.43	25.5
Bra022865.1-P	Field mustard	nucleus	25.19	25.34
Bra022845.1-P	Field mustard	nucleus	26.53	25.14
Bra005642.1-P	Field mustard	nucleus	24.43	25.1
Bra006112.1-P	Field mustard	nucleus	25.57	25.09
Bra015463.1-P	Field mustard	nucleus	26.72	25.09
Bra023338.1-P	Field mustard	nucleus	26.34	25.0
Bra022479.1-P	Field mustard	nucleus	24.81	23.05
Bra018221.1-P	Field mustard	cytosol	18.51	21.6
Bra015460.1-P	Field mustard	nucleus	19.08	19.23
Bra038658.1-P	Field mustard	nucleus	14.89	18.06
Bra038659.1-P	Field mustard	nucleus	17.18	17.96
Bra028646.1-P	Field mustard	nucleus	16.03	17.68
Bra038276.1-P	Field mustard	cytosol	18.51	16.09
Bra029204.1-P	Field mustard	nucleus	13.17	15.51
Bra009365.1-P	Field mustard	cytosol	17.18	13.45
Bra038660.1-P	Field mustard	cytosol	3.63	10.27

Protein Annotations

Gene3D:1.20.120.1750	MapMan:19.2.2.1.5.4.1	Gene3D:3.30.40.10	EnsemblPlantsGene:Bra039068	EnsemblPlants:Bra039068.1	EnsemblPlants:Bra039068.1-P
InterPro:E3_UB_ligase_RBR	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
GO:GO:0046872	InterPro:IBR_dom	InterPro:IPR001841	InterPro:IPR013083	UniProt:M4FD98	PFAM:PF01485
ScanProsite:PS00518	PFscan:PS50089	PANTHER:PTHR11685	PANTHER:PTHR11685:SF150	SMART:SM00647	SUPFAM:SSF57850
UniParc:UPI0002541B9C	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	SEG:seg	:

Description

AT3G27710 (E=3e-196) ATARI13, ARI13 | zinc finger protein-related

Coordinates

chrA09:+:1270728..1272302

Molecular Weight (calculated)

61150.2 Da

IEP (calculated)

5.271

GRAVY (calculated)

-0.648

Length

524 amino acids

Sequence
(BLAST)

001: MDDDYYLSCE EDEEEEEDDY DKVDYDQYEQ AQREETTKST SRIITNESLV AAQKEVLARV MELLTLKKSQ ARTLLIHYQW NVDKLLDVYS ERGKDSLFKT
101: AGLTVFSHTS LSESRYSLRK KMTCEICMDD DLQSYTMTRM DCGHCFCNNC WKEHFTVKIN EGMSKRITCM AHKCNAICDE DVVKKLVYPE IAEKFDRFLV
201: ESYVDDNKRV KWCPSTPHCG NAIRREDDGG EVECSCGHQF CFSCLSESHS PCSCLMWKLW KKKCEDESET LNWITVHTRM CPKCSKSVQR SDGCNLMTCI
301: CGQHFCWLCG GATGLSHTWT TIDGHSCGKF KEEKVKQIEI AKRDLKRYTH YYHQYRSHTD SSKQEFKLRE SVREKVASLS EKTLKSEQKW ASNGADLLFR
401: SRKVLSYTYV FAFYMFGEEL FKDEMSDEER EMKKILFENL QQQLIGYIES LSKTLNQPFD DYSSDELEKM SDETMRFGIV VDNLCKEMYE CIENELLGPT
501: VAGHNHSIAP YRSEGIEKAI EFWC

Best Arabidopsis Sequence Match ( AT3G27710.1 )
(BLAST)

001: MDDDYMMLDD DYGEEEDENY SEDDNYSEAE VDLQPVTSTK STSQVIKKES LVAAQKEILV RVMELLSVKE NQARTLLIYY QWNVEKLFSV FADQGKDRMF
101: SCAGLTVFVP SLVTSKKTMK CDVCMEDDLP SNVMTRMECG HRFCNDCWIG HFTVKINEGE SKRILCMAHE CKAICDEDVV RKLVSPELAD RYDRFLIESY
201: VEDNNMVKWC PSKPHCGSAI RKIEDGHDVV EVGCSCGLQF CFSCLSESHS PCSCLMWKLW KKKCEDESET VNWITVNTKL CPKCSKPIQK RDGCNLMTCK
301: CGQHFCWLCG QATGRDHTYT SIAGHSCGRY KDEKVRQLER AQRDLDRYTH YHYRYKAHID SLKLEDKLRK SILEKAVSNS ETKDQKVFKE YSWVTDAVNR
401: LFISRRILSQ SYPFAFYMFG EELFKDEMSE KEREIKKNLF EDQQQQLEGN VEKLSKILEE PFDEYDHEKV VEMMRHLTNL TAVVDNLCKE MYECIENELL
501: GPIQFGNHNI APYRSKGIEQ ATEFCAESSD CGSSGSS

Arabidopsis Description

ARI3Probable E3 ubiquitin-protein ligase ARI3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVX0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.