Factsheet for AT3G27710.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G27720.1	Thale cress	nucleus	68.53	74.64
Bra033024.1-P	Field mustard	nucleus	62.38	63.69
CDY49768	Canola	nucleus	56.61	63.33
CDY03991	Canola	nucleus	56.8	63.02
CDY20037	Canola	nucleus	61.45	62.98
Bra039068.1-P	Field mustard	nucleus	61.45	62.98
CDY00148	Canola	nucleus	55.87	61.98
AT4G34370.1	Thale cress	nucleus	64.62	58.12
AT2G16090.1	Thale cress	nucleus	61.64	55.82
KRH24517	Soybean	nucleus	58.1	53.79
VIT_18s0001g11740.t01	Wine grape	cytosol	55.49	53.69
KRH29521	Soybean	nucleus	57.73	53.45
VIT_03s0063g02000.t01	Wine grape	nucleus	57.91	52.8
Solyc01g109280.2.1	Tomato	nucleus	57.91	52.71
PGSC0003DMT400064832	Potato	nucleus	57.73	52.54
Solyc04g079780.2.1	Tomato	cytosol	50.84	52.3
PGSC0003DMT400043486	Potato	cytosol	50.47	52.02
GSMUA_Achr6P23120_001	Banana	nucleus	58.1	48.52
EER92613	Sorghum	nucleus	54.19	48.18
Solyc12g089000.1.1	Tomato	nucleus	47.86	47.86
Os03t0233500-01	Rice	nucleus	54.19	47.55
PGSC0003DMT400039948	Potato	nucleus	48.04	47.51
TraesCS4D01G238400.2	Wheat	nucleus	54.75	47.42
HORVU4Hr1G066180.1	Barley	nucleus	54.75	47.42
TraesCS4A01G061500.1	Wheat	nucleus	54.75	47.42
HORVU1Hr1G018020.1	Barley	cytosol	16.2	47.28
TraesCS4B01G236900.1	Wheat	nucleus	54.56	47.26
Zm00001d028285_P003	Maize	nucleus	53.07	45.97
GSMUA_Achr5P01850_001	Banana	nucleus	46.0	45.83
TraesCS4D01G070400.1	Wheat	nucleus	41.9	42.13
TraesCS4B01G071700.1	Wheat	nucleus	41.71	41.4
TraesCS4A01G243200.1	Wheat	nucleus	41.53	40.69
TraesCS4B01G071800.1	Wheat	nucleus	41.15	40.26
HORVU7Hr1G068450.2	Barley	nucleus	19.18	40.23
TraesCS4D01G070600.1	Wheat	nucleus	40.22	40.15
EER93790	Sorghum	nucleus	40.22	39.85
Os03t0625800-01	Rice	cytosol	40.04	39.81
Zm00001d013716_P002	Maize	nucleus	38.36	38.58
EER93787	Sorghum	nucleus	38.36	38.5
Os03t0625933-00	Rice	nucleus	23.28	37.99
Zm00001d048017_P003	Maize	nucleus	53.82	37.78
TraesCS4D01G069600.1	Wheat	nucleus	37.06	37.27
TraesCS4B01G070800.1	Wheat	nucleus	36.69	36.75
TraesCS4A01G244200.1	Wheat	nucleus	36.5	36.57
HORVU4Hr1G011910.1	Barley	cytosol, plastid	41.15	36.11
HORVU4Hr1G011770.1	Barley	nucleus	35.2	35.2
Os03t0626100-01	Rice	nucleus	36.69	34.56
AT2G31760.1	Thale cress	nucleus	25.7	26.85
AT2G31780.1	Thale cress	nucleus	21.79	26.41
AT2G31770.1	Thale cress	nucleus	25.7	25.41
AT2G31510.1	Thale cress	nucleus	26.44	25.27
AT1G05890.2	Thale cress	cytosol, endoplasmic reticulum, nucleus	27.56	24.92
AT1G65430.1	Thale cress	nucleus	24.77	23.46
AT1G05880.2	Thale cress	cytosol	18.81	20.36
AT5G08730.1	Thale cress	cytosol	17.88	19.2
AT5G63760.2	Thale cress	nucleus	15.08	17.92
AT5G63750.1	Thale cress	nucleus	17.13	17.16
AT5G63730.1	Thale cress	cytosol	14.34	15.22

Protein Annotations

Gene3D:1.20.120.1750	MapMan:19.2.2.1.5.4.1	Gene3D:3.30.40.10	EntrezGene:822393	UniProt:A0A178VDF7	ProteinID:AEE77355.1
Symbol:ARI3	ArrayExpress:AT3G27710	EnsemblPlantsGene:AT3G27710	RefSeq:AT3G27710	TAIR:AT3G27710	RefSeq:AT3G27710-TAIR-G
EnsemblPlants:AT3G27710.1	TAIR:AT3G27710.1	EMBL:AY072185	EMBL:AY096743	Unigene:At.42915	ProteinID:BAB02695.1
ProteinID:CAD52885.1	ncoils:Coil	InterPro:E3_UB_ligase_RBR	GO:GO:0000151	GO:GO:0000209	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031624	GO:GO:0032436
GO:GO:0042787	GO:GO:0046872	GO:GO:0061630	InterPro:IBR_dom	InterPro:IPR001841	InterPro:IPR013083
RefSeq:NP_189408.1	ProteinID:OAP03814.1	PFAM:PF01485	PFscan:PS50089	PANTHER:PTHR11685	PANTHER:PTHR11685:SF150
UniProt:Q9LVX0	SMART:SM00647	SUPFAM:SSF57850	UniParc:UPI000005E82B	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

ARI3Probable E3 ubiquitin-protein ligase ARI3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVX0]

Coordinates

chr3:+:10269206..10271065

Molecular Weight (calculated)

62157.7 Da

IEP (calculated)

5.025

GRAVY (calculated)

-0.576

Length

537 amino acids

Sequence
(BLAST)

001: MDDDYMMLDD DYGEEEDENY SEDDNYSEAE VDLQPVTSTK STSQVIKKES LVAAQKEILV RVMELLSVKE NQARTLLIYY QWNVEKLFSV FADQGKDRMF
101: SCAGLTVFVP SLVTSKKTMK CDVCMEDDLP SNVMTRMECG HRFCNDCWIG HFTVKINEGE SKRILCMAHE CKAICDEDVV RKLVSPELAD RYDRFLIESY
201: VEDNNMVKWC PSKPHCGSAI RKIEDGHDVV EVGCSCGLQF CFSCLSESHS PCSCLMWKLW KKKCEDESET VNWITVNTKL CPKCSKPIQK RDGCNLMTCK
301: CGQHFCWLCG QATGRDHTYT SIAGHSCGRY KDEKVRQLER AQRDLDRYTH YHYRYKAHID SLKLEDKLRK SILEKAVSNS ETKDQKVFKE YSWVTDAVNR
401: LFISRRILSQ SYPFAFYMFG EELFKDEMSE KEREIKKNLF EDQQQQLEGN VEKLSKILEE PFDEYDHEKV VEMMRHLTNL TAVVDNLCKE MYECIENELL
501: GPIQFGNHNI APYRSKGIEQ ATEFCAESSD CGSSGSS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.