Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G31760.1 | Thale cress | nucleus | 75.39 | 64.98 |
| CDX79439 | Canola | nucleus | 47.86 | 64.83 |
| AT2G31770.1 | Thale cress | nucleus | 72.69 | 59.3 |
| CDY68344 | Canola | nucleus | 65.24 | 58.03 |
| Bra021742.1-P | Field mustard | nucleus | 65.24 | 58.03 |
| CDY68345 | Canola | cytosol | 55.08 | 55.58 |
| CDX84759 | Canola | nucleus | 64.56 | 54.89 |
| Bra022865.1-P | Field mustard | nucleus | 64.56 | 54.89 |
| Bra005642.1-P | Field mustard | nucleus | 62.08 | 53.92 |
| CDY15373 | Canola | nucleus | 65.24 | 52.83 |
| CDY42068 | Canola | nucleus | 53.27 | 51.64 |
| CDY15374 | Canola | nucleus | 64.79 | 50.09 |
| AT2G31510.1 | Thale cress | nucleus | 57.56 | 45.37 |
| AT1G05890.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 59.59 | 44.44 |
| Solyc06g073340.2.1 | Tomato | nucleus | 53.95 | 43.45 |
| PGSC0003DMT400069483 | Potato | nucleus | 54.4 | 43.42 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 53.72 | 43.12 |
| AT1G65430.1 | Thale cress | nucleus | 54.85 | 42.86 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 53.5 | 42.32 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 55.98 | 42.25 |
| Zm00001d003207_P001 | Maize | nucleus | 55.98 | 42.11 |
| EES11042 | Sorghum | nucleus | 55.76 | 41.94 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 55.53 | 41.77 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 55.3 | 41.74 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 55.3 | 41.6 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 55.3 | 41.6 |
| KRH24651 | Soybean | nucleus | 54.85 | 41.47 |
| Zm00001d025750_P011 | Maize | extracellular | 55.08 | 41.43 |
| KRH23186 | Soybean | nucleus | 54.85 | 41.26 |
| KRH29654 | Soybean | nucleus | 54.4 | 41.13 |
| Os04t0492100-01 | Rice | nucleus | 43.79 | 41.1 |
| KRH10154 | Soybean | nucleus | 54.63 | 41.09 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 54.63 | 41.09 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 54.4 | 40.92 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 54.4 | 40.92 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 53.95 | 40.72 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 53.72 | 40.55 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 25.51 | 38.44 |
| Zm00001d046141_P001 | Maize | cytosol | 24.61 | 38.38 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 51.69 | 34.23 |
| CDX79440 | Canola | cytosol | 12.42 | 32.16 |
| AT1G05880.2 | Thale cress | cytosol | 33.18 | 29.64 |
| AT3G27710.1 | Thale cress | nucleus | 26.41 | 21.79 |
| AT2G16090.1 | Thale cress | nucleus | 28.67 | 21.42 |
| AT5G08730.1 | Thale cress | cytosol | 24.15 | 21.4 |
| AT5G63750.1 | Thale cress | nucleus | 25.06 | 20.71 |
| AT4G34370.1 | Thale cress | nucleus | 27.09 | 20.1 |
| AT5G63760.2 | Thale cress | nucleus | 20.32 | 19.91 |
| AT3G27720.1 | Thale cress | nucleus | 21.9 | 19.68 |
| AT5G63730.1 | Thale cress | cytosol | 21.9 | 19.17 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | ProteinID:AEC08583.1 | ArrayExpress:AT2G31780 | EnsemblPlantsGene:AT2G31780 |
| RefSeq:AT2G31780 | TAIR:AT2G31780 | RefSeq:AT2G31780-TAIR-G | EnsemblPlants:AT2G31780.1 | TAIR:AT2G31780.1 | Symbol:ATARI11 |
| Unigene:At.53000 | EMBL:DQ446587 | InterPro:E3_UB_ligase_RBR | GO:GO:0000151 | GO:GO:0000209 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0016758 | GO:GO:0019538 | GO:GO:0031624 |
| GO:GO:0032436 | GO:GO:0042787 | GO:GO:0046872 | GO:GO:0061630 | InterPro:IBR_dom | InterPro:IPR001841 |
| InterPro:IPR013083 | RefSeq:NP_180737.3 | PFAM:PF01485 | ScanProsite:PS00518 | PFscan:PS50089 | PANTHER:PTHR11685 |
| PANTHER:PTHR11685:SF177 | SMART:SM00647 | SUPFAM:SSF57850 | UniParc:UPI0000D5BC88 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| InterPro:Znf_RING_CS | SEG:seg | : | : | : | : |
Description
ATARI11RING/U-box superfamily protein [Source:TAIR;Acc:AT2G31780]
Coordinates
chr2:+:13515199..13517413
Molecular Weight (calculated)
51115.9 Da
IEP (calculated)
4.740
GRAVY (calculated)
-0.605
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSDRDIID IESGEEDLYS DGGNDIIDIE SGEEDLYSDG GNVSDDYNPV DDTISRSEKS YVVVKEEDIL KLQRDDIEQV STVLSVSQVE SIVLLLHYHW
101: CVSKLEDEWF TDEERIRKTV GILKEPVVDV NGTEVDIQCG ICFESYTRKE IARVSCGHPY CKTCWTGYIT TKIEDGPGCL RVKCPEPSCY AVVGQDMIDE
201: VTEKKDKDKY YRYFLRSYVE DGKKMKWCPS PGCEYAVEFG VNGSSSYDVS CLCSYKFCWN CCEDAHSPVD CETVSKWLLK NKDESENMNW ILAKTKPCPK
301: CKRPIEKNTG CNHMSCSAPC RHYFCWACLQ PLSDHKACNA FKADNEDETK RKRAKDAIDR YTHFYERWAF NQSSRLKAMS DLEKWQSVEL KQLSDIQSTP
401: ETQLSFTVDA WLQIIECRRV LKWTYAYGYY ILSQERNKRV FAS
101: CVSKLEDEWF TDEERIRKTV GILKEPVVDV NGTEVDIQCG ICFESYTRKE IARVSCGHPY CKTCWTGYIT TKIEDGPGCL RVKCPEPSCY AVVGQDMIDE
201: VTEKKDKDKY YRYFLRSYVE DGKKMKWCPS PGCEYAVEFG VNGSSSYDVS CLCSYKFCWN CCEDAHSPVD CETVSKWLLK NKDESENMNW ILAKTKPCPK
301: CKRPIEKNTG CNHMSCSAPC RHYFCWACLQ PLSDHKACNA FKADNEDETK RKRAKDAIDR YTHFYERWAF NQSSRLKAMS DLEKWQSVEL KQLSDIQSTP
401: ETQLSFTVDA WLQIIECRRV LKWTYAYGYY ILSQERNKRV FAS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.