Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79440 | Canola | cytosol | 28.7 | 73.68 |
| CDY15374 | Canola | nucleus | 95.9 | 73.47 |
| CDX84759 | Canola | nucleus | 76.54 | 64.49 |
| CDY68344 | Canola | nucleus | 72.89 | 64.26 |
| CDY42068 | Canola | nucleus | 60.36 | 57.99 |
| CDY15373 | Canola | nucleus | 71.3 | 57.22 |
| CDX79439 | Canola | nucleus | 41.91 | 56.27 |
| AT2G31760.1 | Thale cress | nucleus | 65.6 | 56.03 |
| AT2G31780.1 | Thale cress | nucleus | 55.58 | 55.08 |
| AT2G31770.1 | Thale cress | nucleus | 66.74 | 53.96 |
| Os04t0492100-01 | Rice | nucleus | 53.53 | 49.79 |
| CDY34490 | Canola | cytosol | 13.9 | 49.59 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 33.03 | 49.32 |
| CDX84781 | Canola | nucleus | 61.28 | 48.56 |
| CDY19083 | Canola | nucleus | 61.05 | 48.29 |
| CDY15392 | Canola | nucleus | 61.05 | 48.11 |
| CDY23938 | Canola | nucleus | 60.36 | 47.58 |
| CDY10162 | Canola | nucleus | 60.14 | 47.57 |
| CDY47704 | Canola | nucleus | 60.36 | 47.49 |
| CDX86547 | Canola | nucleus | 59.45 | 47.11 |
| CDY63791 | Canola | nucleus | 59.23 | 47.02 |
| Solyc06g073340.2.1 | Tomato | nucleus | 58.31 | 46.55 |
| PGSC0003DMT400069483 | Potato | nucleus | 58.77 | 46.49 |
| CDX70415 | Canola | nucleus | 55.35 | 46.29 |
| CDX78438 | Canola | nucleus | 50.34 | 44.65 |
| KRH23186 | Soybean | nucleus | 59.68 | 44.48 |
| CDY16406 | Canola | nucleus | 55.35 | 44.42 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 55.58 | 44.2 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 56.26 | 44.11 |
| CDY61443 | Canola | nucleus | 54.21 | 44.07 |
| KRH10154 | Soybean | nucleus | 59.0 | 43.97 |
| CDY57807 | Canola | nucleus | 56.49 | 43.97 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 58.77 | 43.95 |
| CDX91196 | Canola | nucleus | 50.8 | 43.81 |
| KRH24651 | Soybean | nucleus | 58.31 | 43.69 |
| EES11042 | Sorghum | nucleus | 58.54 | 43.63 |
| KRH29654 | Soybean | nucleus | 58.09 | 43.52 |
| Zm00001d003207_P001 | Maize | nucleus | 58.31 | 43.46 |
| Zm00001d025750_P011 | Maize | extracellular | 57.86 | 43.12 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 57.86 | 43.12 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 57.86 | 43.12 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 57.86 | 43.12 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 56.95 | 42.59 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 56.72 | 42.42 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 56.72 | 42.27 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 56.72 | 42.27 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 56.72 | 42.27 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 56.04 | 41.91 |
| Zm00001d046141_P001 | Maize | cytosol | 26.2 | 40.49 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 58.09 | 38.12 |
| CDY10159 | Canola | cytosol | 38.95 | 32.39 |
| CDY47702 | Canola | cytosol | 38.27 | 32.25 |
| CDX99146 | Canola | nucleus | 27.11 | 26.68 |
| CDX99147 | Canola | nucleus | 19.82 | 24.58 |
| CDX84438 | Canola | cytosol | 19.82 | 23.64 |
| CDY00148 | Canola | nucleus | 25.06 | 22.73 |
| CDY44786 | Canola | nucleus | 24.37 | 22.2 |
| CDY20037 | Canola | nucleus | 26.42 | 22.14 |
| CDY40734 | Canola | nucleus | 23.46 | 21.59 |
| CDY49768 | Canola | nucleus | 23.46 | 21.46 |
| CDY41533 | Canola | nucleus | 25.74 | 21.28 |
| CDY03991 | Canola | nucleus | 23.01 | 20.87 |
| CDY49559 | Canola | nucleus | 27.56 | 20.79 |
| CDX71262 | Canola | nucleus | 27.33 | 20.65 |
| CDX75425 | Canola | nucleus | 27.79 | 20.64 |
| CDY39850 | Canola | nucleus | 20.96 | 20.63 |
| CDX69049 | Canola | nucleus | 27.79 | 20.44 |
| CDY31353 | Canola | nucleus | 20.27 | 20.0 |
| CDY41534 | Canola | nucleus | 8.43 | 20.0 |
| CDY21562 | Canola | nucleus | 27.11 | 17.92 |
| CDX84439 | Canola | nucleus | 26.42 | 17.68 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 26.2 | 17.14 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078JPH7 | UniProt:A0A078JPH7 | EnsemblPlants:CDY68345 |
| ProteinID:CDY68345 | ProteinID:CDY68345.1 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00073497001 | InterPro:IBR_dom | InterPro:IPR001841 |
| InterPro:IPR013083 | PFAM:PF01485 | ScanProsite:PS00518 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF211 |
| SMART:SM00647 | SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EEA9BF | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| InterPro:Znf_RING_CS | SEG:seg | : | : | : | : |
Description
BnaAnng26980DBnaAnng26980D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JPH7]
Coordinates
chrLK037206:-:4548..6179
Molecular Weight (calculated)
51021.6 Da
IEP (calculated)
6.877
GRAVY (calculated)
-0.577
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: SQVEAIILLL HYQWSPSKIE DEWFTDEEKV RESAGLLKEP VVDLNDKVNI ECGICFDSFL QKDSATVSCG HPYCKTCWTG YITSKINDGP GCLTVQCPEP
101: SCSAVVGQDM INSVITKEED KEKYYKYFLK SYIESSQKKI KWCPSPGCEY AVDFGGESEK YDVSCLCSYE FCWKCCEDAH RPVDCHTVAK WIFKNNDESE
201: NTTWILANTK PCPSCKRQIE KNQGCNHMRC SICKHSFCWA CLDPLNNHKS CHNFRGETEV KREMAKKAID RYMHYYERWV GNQSSRVMAM ADLKKLQSVQ
301: LVKLSVKHGI RETQLQFTVE AWLQIIECRR VLKWTYAYGY YLPEQESTKK RFFEYLQGEA EVGLERLHHC AELEFKELVN ETEYFSKKFE DFRRKLIGLT
401: KVTKTYFENL VKALENGLAD VEPNETKSAT DSNKRQKLV
101: SCSAVVGQDM INSVITKEED KEKYYKYFLK SYIESSQKKI KWCPSPGCEY AVDFGGESEK YDVSCLCSYE FCWKCCEDAH RPVDCHTVAK WIFKNNDESE
201: NTTWILANTK PCPSCKRQIE KNQGCNHMRC SICKHSFCWA CLDPLNNHKS CHNFRGETEV KREMAKKAID RYMHYYERWV GNQSSRVMAM ADLKKLQSVQ
301: LVKLSVKHGI RETQLQFTVE AWLQIIECRR VLKWTYAYGY YLPEQESTKK RFFEYLQGEA EVGLERLHHC AELEFKELVN ETEYFSKKFE DFRRKLIGLT
401: KVTKTYFENL VKALENGLAD VEPNETKSAT DSNKRQKLV
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKVASILVSC FGLLLQRWRM LEAVFCLFVC FFFFGLRLLL YSCNSNYVVL
101: KEEDIRRHQN DDVGRVSAVL SITDVEASTL LLHYHWSVSK VNDEWFADEE RVRRTVGILE GPVVTTPDGR EFTCGICFDS YTLEEIVSVS CGHPFCATCW
201: TGYISTTIND GPGCLMLKCP DPSCPAAIGR DMIDKLASKE DKEKYYRYFL RSYVEVNREM KWCPAPGCEH AIDFAGGTES YDVSCLCSHS FCWNCTEEAH
301: RPVDCDTVGK WILKNSAESE NMNWILANSK PCPKCKRPIE KNHGCMHMTC TPPCKFEFCW LCLNAWTEHG ERTGGFYACN RYEAAKQEGL YDEAERRREM
401: AKNSLERYTH YYERWASNQV SRQKAMGDLQ KMQSEKLGKL SDIQCTPESQ LKFIAEAWLQ IIECRRVLKW TYAYGYYLQD HAKKPFFEYL QGEAESGLER
501: LHKCVEKDIE VFELAEGPSE EFNHFRTKLT GLTSITKTFF ENLVKALENG LADVDSQAAS SKPANSKPSS KTKGGGKGKG SSKNGGSSRN PDGN
101: KEEDIRRHQN DDVGRVSAVL SITDVEASTL LLHYHWSVSK VNDEWFADEE RVRRTVGILE GPVVTTPDGR EFTCGICFDS YTLEEIVSVS CGHPFCATCW
201: TGYISTTIND GPGCLMLKCP DPSCPAAIGR DMIDKLASKE DKEKYYRYFL RSYVEVNREM KWCPAPGCEH AIDFAGGTES YDVSCLCSHS FCWNCTEEAH
301: RPVDCDTVGK WILKNSAESE NMNWILANSK PCPKCKRPIE KNHGCMHMTC TPPCKFEFCW LCLNAWTEHG ERTGGFYACN RYEAAKQEGL YDEAERRREM
401: AKNSLERYTH YYERWASNQV SRQKAMGDLQ KMQSEKLGKL SDIQCTPESQ LKFIAEAWLQ IIECRRVLKW TYAYGYYLQD HAKKPFFEYL QGEAESGLER
501: LHKCVEKDIE VFELAEGPSE EFNHFRTKLT GLTSITKTFF ENLVKALENG LADVDSQAAS SKPANSKPSS KTKGGGKGKG SSKNGGSSRN PDGN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [cytosol,nucleus,endoplasmic reticulum]
SUBAcon: [cytosol,nucleus,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.