Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49559 | Canola | nucleus | 96.04 | 95.88 |
| Bra001960.1-P | Field mustard | nucleus | 95.87 | 95.7 |
| AT2G16090.1 | Thale cress | nucleus | 82.96 | 81.28 |
| CDX75425 | Canola | nucleus | 72.81 | 71.57 |
| CDX69049 | Canola | nucleus | 72.98 | 71.02 |
| VIT_03s0063g02000.t01 | Wine grape | nucleus | 70.4 | 69.44 |
| PGSC0003DMT400064832 | Potato | nucleus | 68.67 | 67.63 |
| Solyc01g109280.2.1 | Tomato | nucleus | 68.33 | 67.29 |
| KRH24517 | Soybean | nucleus | 66.95 | 67.07 |
| KRH29521 | Soybean | nucleus | 66.61 | 66.72 |
| VIT_18s0001g11740.t01 | Wine grape | cytosol | 59.72 | 62.52 |
| CDY49768 | Canola | nucleus | 49.74 | 60.21 |
| CDY03991 | Canola | nucleus | 49.23 | 59.09 |
| PGSC0003DMT400043486 | Potato | cytosol | 52.67 | 58.73 |
| Solyc04g079780.2.1 | Tomato | cytosol | 52.5 | 58.43 |
| CDY20037 | Canola | nucleus | 52.67 | 58.4 |
| EER92613 | Sorghum | nucleus | 60.41 | 58.11 |
| Os03t0233500-01 | Rice | nucleus | 60.76 | 57.68 |
| TraesCS4A01G061500.1 | Wheat | nucleus | 61.27 | 57.42 |
| HORVU4Hr1G066180.1 | Barley | nucleus | 61.1 | 57.26 |
| CDY00148 | Canola | nucleus | 47.68 | 57.23 |
| TraesCS4D01G238400.2 | Wheat | nucleus | 60.93 | 57.1 |
| GSMUA_Achr6P23120_001 | Banana | nucleus | 63.17 | 57.08 |
| TraesCS4B01G236900.1 | Wheat | nucleus | 60.76 | 56.94 |
| Zm00001d028285_P003 | Maize | nucleus | 59.72 | 55.97 |
| PGSC0003DMT400039948 | Potato | nucleus | 51.98 | 55.62 |
| Solyc12g089000.1.1 | Tomato | nucleus | 51.12 | 55.31 |
| HORVU1Hr1G018020.1 | Barley | cytosol | 17.21 | 54.35 |
| GSMUA_Achr5P01850_001 | Banana | nucleus | 46.82 | 50.46 |
| HORVU7Hr1G068450.2 | Barley | nucleus | 21.86 | 49.61 |
| Zm00001d048017_P003 | Maize | nucleus | 59.9 | 45.49 |
| TraesCS4D01G070400.1 | Wheat | nucleus | 40.79 | 44.38 |
| TraesCS4A01G243200.1 | Wheat | nucleus | 41.82 | 44.34 |
| TraesCS4B01G071800.1 | Wheat | nucleus | 41.82 | 44.26 |
| TraesCS4D01G070600.1 | Wheat | nucleus | 40.79 | 44.05 |
| TraesCS4B01G071700.1 | Wheat | nucleus | 40.62 | 43.62 |
| Os03t0625800-01 | Rice | cytosol | 40.1 | 43.15 |
| Zm00001d013716_P002 | Maize | nucleus | 39.41 | 42.88 |
| EER93790 | Sorghum | nucleus | 39.93 | 42.8 |
| Os03t0625933-00 | Rice | nucleus | 23.58 | 41.64 |
| TraesCS4D01G069600.1 | Wheat | nucleus | 37.52 | 40.82 |
| TraesCS4A01G244200.1 | Wheat | nucleus | 37.18 | 40.3 |
| EER93787 | Sorghum | nucleus | 36.83 | 40.0 |
| TraesCS4B01G070800.1 | Wheat | nucleus | 36.66 | 39.74 |
| HORVU4Hr1G011910.1 | Barley | cytosol, plastid | 41.48 | 39.38 |
| HORVU4Hr1G011770.1 | Barley | nucleus | 36.14 | 39.11 |
| Os03t0626100-01 | Rice | nucleus | 35.97 | 36.67 |
| CDY68345 | Canola | cytosol | 20.65 | 27.33 |
| CDX78438 | Canola | nucleus | 23.24 | 27.27 |
| CDX79439 | Canola | nucleus | 15.32 | 27.22 |
| CDY16406 | Canola | nucleus | 25.47 | 27.06 |
| CDY57807 | Canola | nucleus | 25.99 | 26.77 |
| CDX84781 | Canola | nucleus | 25.47 | 26.71 |
| CDY10162 | Canola | nucleus | 25.3 | 26.49 |
| CDY47704 | Canola | nucleus | 25.3 | 26.34 |
| CDX91196 | Canola | nucleus | 23.06 | 26.33 |
| CDY19083 | Canola | nucleus | 25.13 | 26.31 |
| CDX70415 | Canola | nucleus | 23.75 | 26.29 |
| CDY63791 | Canola | nucleus | 24.96 | 26.22 |
| CDX86547 | Canola | nucleus | 24.96 | 26.17 |
| CDY68344 | Canola | nucleus | 22.38 | 26.1 |
| CDY23938 | Canola | nucleus | 24.96 | 26.03 |
| CDY15392 | Canola | nucleus | 24.78 | 25.85 |
| CDY61443 | Canola | nucleus | 23.75 | 25.56 |
| CDX84759 | Canola | nucleus | 22.55 | 25.14 |
| CDX99147 | Canola | nucleus | 14.63 | 24.01 |
| CDY15373 | Canola | nucleus | 22.03 | 23.4 |
| CDY15374 | Canola | nucleus | 22.72 | 23.04 |
| CDY42068 | Canola | nucleus | 17.73 | 22.54 |
| CDX99146 | Canola | nucleus | 16.35 | 21.3 |
| CDX84438 | Canola | cytosol | 13.08 | 20.65 |
| CDY47702 | Canola | cytosol | 18.24 | 20.35 |
| CDY10159 | Canola | cytosol | 18.24 | 20.08 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 9.47 | 18.71 |
| CDY39850 | Canola | nucleus | 14.29 | 18.61 |
| CDY41533 | Canola | nucleus | 16.87 | 18.46 |
| CDY31353 | Canola | nucleus | 13.94 | 18.2 |
| CDX79440 | Canola | cytosol | 5.34 | 18.13 |
| CDY40734 | Canola | nucleus | 14.63 | 17.82 |
| CDY44786 | Canola | nucleus | 14.46 | 17.43 |
| CDY21562 | Canola | nucleus | 17.73 | 15.51 |
| CDY34490 | Canola | cytosol | 3.27 | 15.45 |
| CDX84439 | Canola | nucleus | 16.7 | 14.79 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 16.52 | 14.31 |
| CDY41534 | Canola | nucleus | 4.13 | 12.97 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078C338 | EnsemblPlants:CDX71262 | ProteinID:CDX71262 |
| ProteinID:CDX71262.1 | ncoils:Coil | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00144862001 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF01485 |
| PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF150 | SMART:SM00647 | SUPFAM:SSF57850 | UniPathway:UPA00143 |
| UniParc:UPI0004EEE68C | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
BnaC07g05410D
Coordinates
chrLK031792:-:1991362..1994119
Molecular Weight (calculated)
67015.0 Da
IEP (calculated)
5.334
GRAVY (calculated)
-0.563
Length
581 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDYLSGEEE DDYYYTSDQE SLEGLDHDQS NLQPLSSSGN TAKVITKESL LAAQREDLRR VMELLTLKEH HARTLLIHHR WDVEKLFAVL VEKGKDYLFS
101: GAGLTLVEDD PTFSPSSPMM MTCDICVEDV ATHHMTRMDC GHCFCNNCWA AHFTVKITEG QSKRIRCMAY KCNAICDEDV VRSLVSETQP DLADKFDRFL
201: IESYIEDNKM VKWCPSTPHC GNAIRVEDDE LCEVECSCGF QFCFSCSYQA HSPCSCSMWE LWRKKCHDES ETVNWITVHT KPCPKCFKPV EKNGGCNLVT
301: CICGQSFCWL CGGATGRDHT WSSISGHSCG RYQEDKEKQL ERAKRDLYRY MHYHNRYKAH IDSSKLEDRL SDTILEKVSI LEKRQLQLRD FSWVTSGLHR
401: LFRSRRVLSY SYPFAFYMFG EELFKDEMSA EEREIKQNLF EDQQQQLEVN VEKLSKFLEE PFDQFADDKV TQIRIQVINL SVAVDTLCKT MYECIDNDLL
501: GSLQLGIHNI APYRTNGIER ASDFISSREA AGEKCQPSNS GWNSEDTSCS PRKRPRKEGI YRNSQTTLLD LNLPADVIER K
101: GAGLTLVEDD PTFSPSSPMM MTCDICVEDV ATHHMTRMDC GHCFCNNCWA AHFTVKITEG QSKRIRCMAY KCNAICDEDV VRSLVSETQP DLADKFDRFL
201: IESYIEDNKM VKWCPSTPHC GNAIRVEDDE LCEVECSCGF QFCFSCSYQA HSPCSCSMWE LWRKKCHDES ETVNWITVHT KPCPKCFKPV EKNGGCNLVT
301: CICGQSFCWL CGGATGRDHT WSSISGHSCG RYQEDKEKQL ERAKRDLYRY MHYHNRYKAH IDSSKLEDRL SDTILEKVSI LEKRQLQLRD FSWVTSGLHR
401: LFRSRRVLSY SYPFAFYMFG EELFKDEMSA EEREIKQNLF EDQQQQLEVN VEKLSKFLEE PFDQFADDKV TQIRIQVINL SVAVDTLCKT MYECIDNDLL
501: GSLQLGIHNI APYRTNGIER ASDFISSREA AGEKCQPSNS GWNSEDTSCS PRKRPRKEGI YRNSQTTLLD LNLPADVIER K
001: MDDNLSGEEE DYYYSSDQES LNGIDNDESV SIPVSSRSNT VKVITKESLL AAQREDLRRV MELLSVKEHH ARTLLIHYRW DVEKLFAVLV EKGKDSLFSG
101: AGVTLLENQS CDSSVSGSSS MMSCDICVED VPGYQLTRMD CGHSFCNNCW TGHFTVKINE GQSKRIICMA HKCNAICDED VVRALVSKSQ PDLAEKFDRF
201: LLESYIEDNK MVKWCPSTPH CGNAIRVEDD ELCEVECSCG LQFCFSCSSQ AHSPCSCVMW ELWRKKCFDE SETVNWITVH TKPCPKCHKP VEKNGGCNLV
301: TCLCRQSFCW LCGEATGRDH TWARISGHSC GRFQEDKEKQ MERAKRDLKR YMHYHNRYKA HIDSSKLEAK LSNNISKKVS ISEKRELQLK DFSWATNGLH
401: RLFRSRRVLS YSYPFAFYMF GDELFKDEMS SEEREIKQNL FEDQQQQLEA NVEKLSKFLE EPFDQFADDK VMQIRIQVIN LSVAVDTLCE NMYECIENDL
501: LGSLQLGIHN ITPYRSNGIE RASDFYSSQN SKEAVGQSSD CGWTSRLDQA LESGKSEDTS CSSGKRARID ESYRNSQTTL LDLNLPAEAI ERK
101: AGVTLLENQS CDSSVSGSSS MMSCDICVED VPGYQLTRMD CGHSFCNNCW TGHFTVKINE GQSKRIICMA HKCNAICDED VVRALVSKSQ PDLAEKFDRF
201: LLESYIEDNK MVKWCPSTPH CGNAIRVEDD ELCEVECSCG LQFCFSCSSQ AHSPCSCVMW ELWRKKCFDE SETVNWITVH TKPCPKCHKP VEKNGGCNLV
301: TCLCRQSFCW LCGEATGRDH TWARISGHSC GRFQEDKEKQ MERAKRDLKR YMHYHNRYKA HIDSSKLEAK LSNNISKKVS ISEKRELQLK DFSWATNGLH
401: RLFRSRRVLS YSYPFAFYMF GDELFKDEMS SEEREIKQNL FEDQQQQLEA NVEKLSKFLE EPFDQFADDK VMQIRIQVIN LSVAVDTLCE NMYECIENDL
501: LGSLQLGIHN ITPYRSNGIE RASDFYSSQN SKEAVGQSSD CGWTSRLDQA LESGKSEDTS CSSGKRARID ESYRNSQTTL LDLNLPAEAI ERK
Arabidopsis Description
ARI2Probable E3 ubiquitin-protein ligase ARI2 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.