Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022865.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX79440 | Canola | cytosol | 32.05 | 97.66 |
| CDX79439 | Canola | nucleus | 57.97 | 92.35 |
| CDY68345 | Canola | cytosol | 64.49 | 76.54 |
| CDY68344 | Canola | nucleus | 67.95 | 71.08 |
| CDY42068 | Canola | nucleus | 60.08 | 68.49 |
| CDY15374 | Canola | nucleus | 73.13 | 66.49 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 37.04 | 65.65 |
| CDY15373 | Canola | nucleus | 67.95 | 64.72 |
| AT2G31780.1 | Thale cress | nucleus | 54.89 | 64.56 |
| AT2G31760.1 | Thale cress | nucleus | 62.0 | 62.84 |
| AT2G31770.1 | Thale cress | nucleus | 62.96 | 60.41 |
| CDX84781 | Canola | nucleus | 59.5 | 55.96 |
| CDY63791 | Canola | nucleus | 58.93 | 55.52 |
| CDY10162 | Canola | nucleus | 59.12 | 55.5 |
| CDY15392 | Canola | nucleus | 59.12 | 55.3 |
| CDY19083 | Canola | nucleus | 58.73 | 55.14 |
| CDY23938 | Canola | nucleus | 58.93 | 55.12 |
| CDX86547 | Canola | nucleus | 58.54 | 55.05 |
| CDY47704 | Canola | nucleus | 58.73 | 54.84 |
| CDX70415 | Canola | nucleus | 52.59 | 52.19 |
| Solyc06g073340.2.1 | Tomato | nucleus | 54.32 | 51.45 |
| CDY34490 | Canola | cytosol | 12.09 | 51.22 |
| PGSC0003DMT400069483 | Potato | nucleus | 54.13 | 50.81 |
| CDX78438 | Canola | nucleus | 47.98 | 50.51 |
| CDX91196 | Canola | nucleus | 49.14 | 50.29 |
| CDY16406 | Canola | nucleus | 52.21 | 49.73 |
| CDY61443 | Canola | nucleus | 51.44 | 49.63 |
| CDY57807 | Canola | nucleus | 53.36 | 49.29 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 51.63 | 48.73 |
| KRH23186 | Soybean | nucleus | 55.09 | 48.73 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 54.89 | 48.72 |
| Os04t0492100-01 | Rice | nucleus | 43.95 | 48.52 |
| KRH10154 | Soybean | nucleus | 54.51 | 48.22 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 51.82 | 48.21 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 54.13 | 48.04 |
| Zm00001d003207_P001 | Maize | nucleus | 54.13 | 47.88 |
| EES11042 | Sorghum | nucleus | 54.13 | 47.88 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 54.13 | 47.88 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 53.93 | 47.87 |
| KRH24651 | Soybean | nucleus | 53.74 | 47.78 |
| Zm00001d025750_P011 | Maize | extracellular | 53.93 | 47.71 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 53.93 | 47.71 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 53.74 | 47.54 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 53.74 | 47.54 |
| KRH29654 | Soybean | nucleus | 53.36 | 47.44 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 53.55 | 47.37 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 53.55 | 47.37 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 52.98 | 47.02 |
| Zm00001d046141_P001 | Maize | cytosol | 21.5 | 39.44 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 50.48 | 39.31 |
| CDY47702 | Canola | cytosol | 35.12 | 35.12 |
| CDY10159 | Canola | cytosol | 35.51 | 35.04 |
| CDX99146 | Canola | nucleus | 24.57 | 28.7 |
| CDX84438 | Canola | cytosol | 19.0 | 26.9 |
| CDX99147 | Canola | nucleus | 18.23 | 26.84 |
| CDY00148 | Canola | nucleus | 24.38 | 26.24 |
| CDY20037 | Canola | nucleus | 25.53 | 25.38 |
| CDY40734 | Canola | nucleus | 22.46 | 24.53 |
| CDY49768 | Canola | nucleus | 22.46 | 24.38 |
| CDY44786 | Canola | nucleus | 22.46 | 24.27 |
| CDY03991 | Canola | nucleus | 22.46 | 24.17 |
| CDY41533 | Canola | nucleus | 23.99 | 23.54 |
| CDY49559 | Canola | nucleus | 25.91 | 23.2 |
| CDX75425 | Canola | nucleus | 26.3 | 23.18 |
| CDX69049 | Canola | nucleus | 26.3 | 22.95 |
| CDX71262 | Canola | nucleus | 25.14 | 22.55 |
| CDY39850 | Canola | nucleus | 19.19 | 22.42 |
| CDY31353 | Canola | nucleus | 18.81 | 22.02 |
| CDY41534 | Canola | nucleus | 7.1 | 20.0 |
| CDY21562 | Canola | nucleus | 24.57 | 19.28 |
| CDX84439 | Canola | nucleus | 24.18 | 19.21 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 23.8 | 18.48 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078D8W4 | EnsemblPlants:CDX84759 | ProteinID:CDX84759 |
| ProteinID:CDX84759.1 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00142050001 | InterPro:IBR_dom |
| InterPro:IPR001841 | InterPro:IPR001878 | InterPro:IPR013083 | PFAM:PF00097 | PFAM:PF01485 | ScanProsite:PS00518 |
| PFscan:PS50089 | PFscan:PS50158 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 | SMART:SM00647 | SUPFAM:SSF57850 |
| UniPathway:UPA00143 | UniParc:UPI0002540331 | InterPro:Znf_C3HC4_RING-type | InterPro:Znf_CCHC | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| InterPro:Znf_RING_CS | SEG:seg | : | : | : | : |
Description
BnaA03g14710D
Coordinates
chrLK031838:-:1118802..1120488
Molecular Weight (calculated)
60146.5 Da
IEP (calculated)
6.084
GRAVY (calculated)
-0.701
Length
521 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYSDDDGMV DTDSGEESLL SDNQVDSDYE FTDQDVDNAS TSKRSQISYF KEEDVRKHQR TDIEQVSTVL SISQVEAIVL LLHYQWNVSK VEDEWFTDEK
101: KVRELVGMLK EPVVDLNDRE VNIECGICFD SYTQKEVTTL SCGHPYCNVC WTGYITTTIN DGPGCLTVKC PEPSCSAVTA CQYMVDKVIT DKELKEKYYR
201: YFVRSYVEAS GNKIKWCPSP GCEYAIDFAS GSRSEHYDVS CLCSYEFCWN CGEDAHRPVD CDTVSKWISK NTDESENTNW ILANTKPCPN CKRQIEKSMG
301: CNHMGCSICK HSFCWNCLGP MKGHRNCHKF KGGNETDVKR KRAKRAIDRY MHYYERWASN QSSRLIAMAD LKKLQSVQLK WLSIRQGTTE SQLQFTVEAW
401: RQIIECRRVL KWTYAYGYYL PEEEQTKKEF FEYLQGEAEA GLERLHHCAE EELKHFVFET QDSSKNFGDF RRKLTGLTEA TKTYFENLVK ALENGLADVA
501: LSESSKSKTK SKPATKRRKL K
101: KVRELVGMLK EPVVDLNDRE VNIECGICFD SYTQKEVTTL SCGHPYCNVC WTGYITTTIN DGPGCLTVKC PEPSCSAVTA CQYMVDKVIT DKELKEKYYR
201: YFVRSYVEAS GNKIKWCPSP GCEYAIDFAS GSRSEHYDVS CLCSYEFCWN CGEDAHRPVD CDTVSKWISK NTDESENTNW ILANTKPCPN CKRQIEKSMG
301: CNHMGCSICK HSFCWNCLGP MKGHRNCHKF KGGNETDVKR KRAKRAIDRY MHYYERWASN QSSRLIAMAD LKKLQSVQLK WLSIRQGTTE SQLQFTVEAW
401: RQIIECRRVL KWTYAYGYYL PEEEQTKKEF FEYLQGEAEA GLERLHHCAE EELKHFVFET QDSSKNFGDF RRKLTGLTEA TKTYFENLVK ALENGLADVA
501: LSESSKSKTK SKPATKRRKL K
001: MDFSDDDMID NKSGEENYSY GGGNESDDYN DVVDTIIPSE KSYVILKEED ILKLQRDDIE RVSSILSLSQ VEVIVLLLHY NWCVSKVEDE WFTDEERIRK
101: AVGLLKEPVV DFNGGEKDKK CRKVNIQCGI CFESYTREEI ARVSCGHPYC KTCWAGYITT KIEDGPGCLR VKCPEPSCSA AVGKDMIEDV TETKVNEKYS
201: RYILRSYVED GKKIKWCPSP GCGYAVEFGG SESSSYDVSC LCSYRFCWNC SEDAHSPVDC DTVSKWIFKN QDESENKNWM LANSKPCPEC KRPIEKNDGC
301: NHMTCSAPCG HEFCWICLKA YRRHSGACNR FVVEQAESKR ALLQSEIKRY THYYVRWAEN QSSRLKAMRD LEKLQSVQLK ELSDNQCTSE TQLQFTVDAW
401: LQIIECRRVL KWTYAYGYYL QDLPKRKFFE YLQGEAESGL ERLHHCAENE LKQFFIKSED PSDTFNAFRM KLTGLTTVTK TYFENLVKAL ENGLVDVTHN
501: EFPPDNETKS TQEKYEEYQD YEDDFLETQR LYDEALLSGC YYD
101: AVGLLKEPVV DFNGGEKDKK CRKVNIQCGI CFESYTREEI ARVSCGHPYC KTCWAGYITT KIEDGPGCLR VKCPEPSCSA AVGKDMIEDV TETKVNEKYS
201: RYILRSYVED GKKIKWCPSP GCGYAVEFGG SESSSYDVSC LCSYRFCWNC SEDAHSPVDC DTVSKWIFKN QDESENKNWM LANSKPCPEC KRPIEKNDGC
301: NHMTCSAPCG HEFCWICLKA YRRHSGACNR FVVEQAESKR ALLQSEIKRY THYYVRWAEN QSSRLKAMRD LEKLQSVQLK ELSDNQCTSE TQLQFTVDAW
401: LQIIECRRVL KWTYAYGYYL QDLPKRKFFE YLQGEAESGL ERLHHCAENE LKQFFIKSED PSDTFNAFRM KLTGLTTVTK TYFENLVKAL ENGLVDVTHN
501: EFPPDNETKS TQEKYEEYQD YEDDFLETQR LYDEALLSGC YYD
Arabidopsis Description
ARI9Probable E3 ubiquitin-protein ligase ARI9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKC3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.