Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025750_P011 | Maize | extracellular | 97.96 | 97.96 |
| Zm00001d003207_P001 | Maize | nucleus | 97.79 | 97.79 |
| Os04t0492100-01 | Rice | nucleus | 75.55 | 94.28 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 92.36 | 92.36 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 92.19 | 92.19 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 92.19 | 92.19 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 86.59 | 86.88 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 86.08 | 86.08 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 86.08 | 86.08 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 86.08 | 86.08 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 76.4 | 80.36 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 79.97 | 80.24 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 74.36 | 79.35 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 76.23 | 76.49 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 75.38 | 75.64 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 84.38 | 74.29 |
| Bra021726.1-P | Field mustard | nucleus | 62.65 | 73.51 |
| KRH23186 | Soybean | nucleus | 73.17 | 73.17 |
| KRH29654 | Soybean | nucleus | 72.67 | 73.04 |
| KRH10154 | Soybean | nucleus | 72.84 | 72.84 |
| Solyc06g073340.2.1 | Tomato | nucleus | 67.57 | 72.36 |
| KRH24651 | Soybean | nucleus | 71.99 | 72.35 |
| Bra022845.1-P | Field mustard | nucleus | 67.57 | 71.97 |
| PGSC0003DMT400069483 | Potato | nucleus | 67.74 | 71.89 |
| AT2G31510.1 | Thale cress | nucleus | 68.59 | 71.89 |
| CDX84781 | Canola | nucleus | 67.57 | 71.84 |
| CDY15392 | Canola | nucleus | 67.91 | 71.81 |
| CDY19083 | Canola | nucleus | 67.57 | 71.71 |
| CDY23938 | Canola | nucleus | 66.72 | 70.56 |
| CDY47704 | Canola | nucleus | 65.7 | 69.35 |
| Bra015463.1-P | Field mustard | nucleus | 65.53 | 69.18 |
| CDY10162 | Canola | nucleus | 64.69 | 68.65 |
| CDX86547 | Canola | nucleus | 64.01 | 68.05 |
| CDY63791 | Canola | nucleus | 63.5 | 67.63 |
| CDY34490 | Canola | cytosol | 13.07 | 62.6 |
| AT1G05890.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 62.99 | 62.46 |
| CDX79440 | Canola | cytosol | 17.83 | 61.4 |
| EES15269 | Sorghum | nucleus | 60.95 | 60.23 |
| Zm00001d046141_P001 | Maize | cytosol | 28.86 | 59.86 |
| CDY68344 | Canola | nucleus | 50.42 | 59.64 |
| CDX70415 | Canola | nucleus | 52.97 | 59.43 |
| Bra021742.1-P | Field mustard | nucleus | 50.08 | 59.24 |
| CDY68345 | Canola | cytosol | 43.63 | 58.54 |
| Bra006112.1-P | Field mustard | nucleus | 52.97 | 58.43 |
| CDX78438 | Canola | nucleus | 48.73 | 57.98 |
| CDX91196 | Canola | nucleus | 49.58 | 57.37 |
| Bra023338.1-P | Field mustard | nucleus | 53.48 | 57.07 |
| CDY61443 | Canola | nucleus | 51.61 | 56.3 |
| AT2G31780.1 | Thale cress | nucleus | 41.94 | 55.76 |
| Bra005642.1-P | Field mustard | nucleus | 47.2 | 54.51 |
| Bra022865.1-P | Field mustard | nucleus | 47.88 | 54.13 |
| CDX84759 | Canola | nucleus | 47.88 | 54.13 |
| AT2G31760.1 | Thale cress | nucleus | 47.2 | 54.09 |
| CDY15373 | Canola | nucleus | 50.08 | 53.93 |
| AT2G31770.1 | Thale cress | nucleus | 48.9 | 53.04 |
| CDY42068 | Canola | nucleus | 40.75 | 52.52 |
| CDY15374 | Canola | nucleus | 50.76 | 52.18 |
| CDX79439 | Canola | nucleus | 28.18 | 50.76 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 23.26 | 46.6 |
| EES08942 | Sorghum | cytosol | 37.52 | 39.89 |
| KXG36175 | Sorghum | nucleus | 35.48 | 38.0 |
| OQU83976 | Sorghum | cytosol | 34.13 | 37.71 |
| OQU83975 | Sorghum | nucleus | 37.18 | 36.68 |
| EES08939 | Sorghum | nucleus | 37.18 | 33.33 |
| EER92613 | Sorghum | nucleus | 25.47 | 24.83 |
| EER93787 | Sorghum | nucleus | 22.24 | 24.49 |
| EER93790 | Sorghum | nucleus | 22.24 | 24.17 |
| EES08947 | Sorghum | nucleus | 40.41 | 21.94 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | EntrezGene:8060188 | UniProt:C5YBD5 | InterPro:E3_UB_ligase_RBR |
| EnsemblPlants:EES11042 | ProteinID:EES11042 | ProteinID:EES11042.1 | GO:GO:0000151 | GO:GO:0000209 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031624 | GO:GO:0032436 |
| GO:GO:0042787 | GO:GO:0046872 | GO:GO:0061630 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR001876 |
| InterPro:IPR013083 | PFAM:PF01485 | ScanProsite:PS01358 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 |
| SMART:SM00547 | SMART:SM00647 | EnsemblPlantsGene:SORBI_3006G131000 | SUPFAM:SSF57850 | SUPFAM:SSF90209 | unigene:Sbi.6844 |
| UniParc:UPI0001A86CE1 | RefSeq:XP_002446714.1 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RanBP2 | InterPro:Znf_RanBP2_sf |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:49526695..49535989
Molecular Weight (calculated)
66416.7 Da
IEP (calculated)
5.069
GRAVY (calculated)
-0.764
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MESEDDMHDA NDSAEDDFYS GGEAGLAASD DGDADYDFAD HDSDDSAELL SHRQQQNYSI LSEVDIKRRQ EDDINRVSTV LSISKPEACV LLRNYNWSVS
101: KVHDEWFADE ERVRKVVGLP EKHNEMPNDR EVTCGICFES CPRGSMSAAA CGHPFCGTCW RGYISTAISD GPGCLMLRCP DPSCAAAVGQ DMINSLADDE
201: DKEKYGRYLC RSYIEDNRKT KWCPAPGCEY AVEFVMGSGS YDVNCNCSYG FCWNCTEEAH RPVDCATVSK WILKNSAESE NMNWILANSK PCPKCKRPIE
301: KNQGCMHITC TPPCKFEFCW LCLGPWSEHG ERTGGFYACN RYESARQEGA YDESERRREM AKNSLERYTH YYERWAANQS SRQKALGDLQ SLQNDKLEKL
401: SDIQSQPESQ LKFIIEAWLQ IVECRRVLKW TYAYGFYLPE HEHAKRQFFE YLQGEAESGL ERLHQCAEKE LQIYLDAECP SKDFNDFRTK LAGLTSVTRN
501: YFENLVRALE TGLNDVGPST SHGTCSKSAT SKSLGGKSKS GKNRASSTSS KSGGSSRGGD DSNIWTCDQC TYANPRSARA CQACDRQHR
101: KVHDEWFADE ERVRKVVGLP EKHNEMPNDR EVTCGICFES CPRGSMSAAA CGHPFCGTCW RGYISTAISD GPGCLMLRCP DPSCAAAVGQ DMINSLADDE
201: DKEKYGRYLC RSYIEDNRKT KWCPAPGCEY AVEFVMGSGS YDVNCNCSYG FCWNCTEEAH RPVDCATVSK WILKNSAESE NMNWILANSK PCPKCKRPIE
301: KNQGCMHITC TPPCKFEFCW LCLGPWSEHG ERTGGFYACN RYESARQEGA YDESERRREM AKNSLERYTH YYERWAANQS SRQKALGDLQ SLQNDKLEKL
401: SDIQSQPESQ LKFIIEAWLQ IVECRRVLKW TYAYGFYLPE HEHAKRQFFE YLQGEAESGL ERLHQCAEKE LQIYLDAECP SKDFNDFRTK LAGLTSVTRN
501: YFENLVRALE TGLNDVGPST SHGTCSKSAT SKSLGGKSKS GKNRASSTSS KSGGSSRGGD DSNIWTCDQC TYANPRSARA CQACDRQHR
001: MEADDDFYSG TENYSDYADS DEDDADGEYE FVDDAADDSD DLIFRRRQQN YSVLSEADIC KLQEDDISRI STVLSISRNS SAILLRHYNW CVSRVHDEWF
101: ADEEKVRDAV GLLEKPVVDF PTDGELDCGI CFETFLSDKL HAAACGHPFC DSCWEGYITT AINDGPGCLT LRCPDPSCRA AVGQDMINLL APDKDKQKYT
201: SYFVRSYVED NRKTKWCPAP GCDYAVNFVV GSGNYDVNCR CCYSFCWNCA EEAHRPVDCD TVSKWVLKNS AESENMNWIL ANSKPCPKCK RPIEKNQGCM
301: HITCTPPCKF EFCWLCLGAW TEHGEKTGGF YACNRYEAAK QDGIYDETEK RREMAKNSLE RYTHYYERWA TNQSSRQKAL LDLKKMQTDD IEKLSDIQCQ
401: PESQLKFIIE AWLQIVECRR VLKWTYAYGF YIPDQEHGKR VFFEYLQGEA ESGLERLHQC AEKELLPYLD AKGPSEDFNE FRTKLAGLTS VTKNYFENLV
501: RALENGLSDV NSHDAYDRTS SSKSLGGKTK GSSSKASSSD SSHWPCEYCT YVNPRSTTIC QMCEHGR
101: ADEEKVRDAV GLLEKPVVDF PTDGELDCGI CFETFLSDKL HAAACGHPFC DSCWEGYITT AINDGPGCLT LRCPDPSCRA AVGQDMINLL APDKDKQKYT
201: SYFVRSYVED NRKTKWCPAP GCDYAVNFVV GSGNYDVNCR CCYSFCWNCA EEAHRPVDCD TVSKWVLKNS AESENMNWIL ANSKPCPKCK RPIEKNQGCM
301: HITCTPPCKF EFCWLCLGAW TEHGEKTGGF YACNRYEAAK QDGIYDETEK RREMAKNSLE RYTHYYERWA TNQSSRQKAL LDLKKMQTDD IEKLSDIQCQ
401: PESQLKFIIE AWLQIVECRR VLKWTYAYGF YIPDQEHGKR VFFEYLQGEA ESGLERLHQC AEKELLPYLD AKGPSEDFNE FRTKLAGLTS VTKNYFENLV
501: RALENGLSDV NSHDAYDRTS SSKSLGGKTK GSSSKASSSD SSHWPCEYCT YVNPRSTTIC QMCEHGR
Arabidopsis Description
ARI8ATARI8 [Source:UniProtKB/TrEMBL;Acc:A0A178WLP2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.