CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83975	Sorghum	nucleus	68.77	63.82
Os09t0559000-00	Rice	cytosol	54.33	57.33
OQU83976	Sorghum	cytosol	54.51	56.66
HORVU3Hr1G019640.1	Barley	cytosol, peroxisome, plastid	19.68	51.17
EES08939	Sorghum	nucleus	56.5	47.64
HORVU3Hr1G049680.1	Barley	nucleus	30.14	46.01
KXG36175	Sorghum	nucleus	41.52	41.82
HORVU5Hr1G089940.1	Barley	cytosol	25.09	41.74
HORVU5Hr1G089020.2	Barley	nucleus	44.95	41.09
EES11042	Sorghum	nucleus	39.89	37.52
Os09t0559100-00	Rice	nucleus	12.64	35.53
EES15269	Sorghum	nucleus	38.09	35.4
EES08947	Sorghum	nucleus	55.78	28.48
EER93787	Sorghum	nucleus	21.84	22.62
EER93790	Sorghum	nucleus	21.3	21.77
EER92613	Sorghum	nucleus	22.74	20.86

Protein Annotations

Gene3D:1.20.120.1750	MapMan:19.2.2.1.5.4.1	Gene3D:3.30.40.10	EntrezGene:8070198	UniProt:C5Y7I5	InterPro:E3_UB_ligase_RBR
EnsemblPlants:EES08942	ProteinID:EES08942	ProteinID:EES08942.1	GO:GO:0000151	GO:GO:0000209	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031624	GO:GO:0032436
GO:GO:0042787	GO:GO:0046872	GO:GO:0061630	InterPro:IBR_dom	InterPro:IPR013083	PFAM:PF01485
PANTHER:PTHR11685	PANTHER:PTHR11685:SF216	SMART:SM00647	EnsemblPlantsGene:SORBI_3005G208700	SUPFAM:SSF57850	UniParc:UPI0001A8631D
RefSeq:XP_002449954.1	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:69531128..69532792

Molecular Weight (calculated)

61962.6 Da

IEP (calculated)

5.906

GRAVY (calculated)

-0.569

Length

554 amino acids

Sequence
(BLAST)

001: MKKTNKDGDG DNGLSKTCPI AAASTAGTGE TGDDTEDYNK NGDEIDDNGD CTGEEDLIYY YSDDEETTEV DGAEPIERAD ERYIVLSQDA IRGRQEADIA
101: KVTDVLSVPP GIAAVLLRHY KWRVMRLQEE WFSDDRRIRD AVGLPADGGV LVPTALISRR RVAVDCAICF GSFPAGRTRS AACSTHLYCV ECWRGYVRAA
201: VEDGPRCLSL RCPDTSCSAA VARELVDEVA DAKDRARYAR FALWSFVDES GGRVKWCPGR GCSRAVEFVG CAGDATDVLC ECTHGFCWSC GEEAHRPVSC
301: ETVRAWLAKN VSDSETANWV LTNTKLCPKC RRPIEKNQGC NNMTCSAPCY CRFCWICLQP LGRRHIGCHG YRAQPGKVNA GGKDEQRREQ AKASLDRYLY
401: HYERWAANDT SLQKVFKDMA DLEGNKGLEK MAKKVRVPAS DLRFLTRAYE QVADGRRVLR WAHAYGYFLD PKRDAIKRNL FDQLQKDANS SLERLHGCAE
501: GERMELCAGD AADVGERYKS YKEKLQSLTQ VTRHYFENLV KAFETNLAEV ETTE

Best Arabidopsis Sequence Match ( AT2G31510.1 )
(BLAST)

001: MDSEEDMLDA HDMESGEDDF YSGGTDDCND SDDGEPDYGF VEEDADDSAM IASHRSQKNF CVLREEDIRR HQMDNIERVS VVLSITEVEA SILLRHFHWS
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL

Arabidopsis Description

ARI7Probable E3 ubiquitin-protein ligase ARI7 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.