Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G019640.1 | Barley | cytosol, peroxisome, plastid | 19.09 | 49.3 |
| HORVU3Hr1G049680.1 | Barley | nucleus | 28.91 | 43.8 |
| OQU83976 | Sorghum | cytosol | 42.18 | 43.53 |
| EES08942 | Sorghum | cytosol | 41.82 | 41.52 |
| HORVU5Hr1G089940.1 | Barley | cytosol | 25.09 | 41.44 |
| HORVU5Hr1G089020.2 | Barley | nucleus | 43.09 | 39.11 |
| OQU83975 | Sorghum | nucleus | 41.82 | 38.53 |
| EES08939 | Sorghum | nucleus | 42.91 | 35.92 |
| EES15269 | Sorghum | nucleus | 38.73 | 35.74 |
| EES11042 | Sorghum | nucleus | 38.0 | 35.48 |
| EER93787 | Sorghum | nucleus | 23.82 | 24.49 |
| EER93790 | Sorghum | nucleus | 24.0 | 24.35 |
| EES08947 | Sorghum | nucleus | 44.55 | 22.58 |
| EER92613 | Sorghum | nucleus | 24.73 | 22.52 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | UniProt:A0A1B6QE31 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | InterPro:IBR_dom |
| InterPro:IPR001841 | InterPro:IPR013083 | EnsemblPlants:KXG36175 | ProteinID:KXG36175 | ProteinID:KXG36175.1 | PFAM:PF01485 |
| ScanProsite:PS00518 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF216 | SMART:SM00647 | EnsemblPlantsGene:SORBI_3002G295200 |
| SUPFAM:SSF57850 | UniParc:UPI00081AB47B | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:-:67265964..67267616
Molecular Weight (calculated)
61506.0 Da
IEP (calculated)
4.469
GRAVY (calculated)
-0.512
Length
550 amino acids
Sequence
(BLAST)
(BLAST)
001: MKYYYSDGEE SYNSYDDDDS ENYSSSVEDD AMDEDESCQS DGDDVGGDVV SDNDDDMPQA AERNDKGYIF ETEADVRKRQ DEVTASVSEL LSVPWGLAAV
101: FLRHCRWDAE RLENEWFADE RRVREAVGLT AEQGDAATSV NDRPLTCAIC FDVHSAGEMI SAGCAHYYCR ECWGGYIHAA VGDGARCLVL RCPDPSCGAP
201: VTRELVREVF AAGEDDDDDR ARYEAFVVRS YVEEGTSKYV RWCPGPGCTL AVRAEPGSAP YEVACCKCRH VFCFRCGEEA HRPASCGTAR EWVTKNSSDG
301: ENDNWVVANT KHCPSCRVAI EKNQGCNHMT CAAPCLHQFC WICLGAWSEH GGNYYHCNRY VAHAPENARE EERREHAKAS LERYIHFYER WAAHGSSMKK
401: AREDLERLEG GALAGFAEAN GVSQAELGCL EEALALIMES RRVLRWTYPF VYYMDPVRDG KKIELCEHIQ GEAEDSLEKL HKCVESEWDE LKVTAAAPGA
501: EFDAATAAVF AAAFKEYMLK LFVLNTATRN HLKMLVEGFE SGLPEFEGTL
101: FLRHCRWDAE RLENEWFADE RRVREAVGLT AEQGDAATSV NDRPLTCAIC FDVHSAGEMI SAGCAHYYCR ECWGGYIHAA VGDGARCLVL RCPDPSCGAP
201: VTRELVREVF AAGEDDDDDR ARYEAFVVRS YVEEGTSKYV RWCPGPGCTL AVRAEPGSAP YEVACCKCRH VFCFRCGEEA HRPASCGTAR EWVTKNSSDG
301: ENDNWVVANT KHCPSCRVAI EKNQGCNHMT CAAPCLHQFC WICLGAWSEH GGNYYHCNRY VAHAPENARE EERREHAKAS LERYIHFYER WAAHGSSMKK
401: AREDLERLEG GALAGFAEAN GVSQAELGCL EEALALIMES RRVLRWTYPF VYYMDPVRDG KKIELCEHIQ GEAEDSLEKL HKCVESEWDE LKVTAAAPGA
501: EFDAATAAVF AAAFKEYMLK LFVLNTATRN HLKMLVEGFE SGLPEFEGTL
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.