Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES08942 | Sorghum | cytosol | 63.82 | 68.77 |
| OQU83976 | Sorghum | cytosol | 51.76 | 57.97 |
| Os09t0559000-00 | Rice | cytosol | 50.08 | 56.95 |
| HORVU3Hr1G019640.1 | Barley | cytosol, peroxisome, plastid | 18.59 | 52.11 |
| EES08939 | Sorghum | nucleus | 51.76 | 47.03 |
| HORVU3Hr1G049680.1 | Barley | nucleus | 27.3 | 44.9 |
| KXG36175 | Sorghum | nucleus | 38.53 | 41.82 |
| HORVU5Hr1G089020.2 | Barley | nucleus | 41.71 | 41.09 |
| HORVU5Hr1G089940.1 | Barley | cytosol | 22.61 | 40.54 |
| Os09t0559100-00 | Rice | nucleus | 12.4 | 37.56 |
| EES11042 | Sorghum | nucleus | 36.68 | 37.18 |
| EES15269 | Sorghum | nucleus | 35.51 | 35.57 |
| EES08947 | Sorghum | nucleus | 52.93 | 29.12 |
| EER93787 | Sorghum | nucleus | 20.94 | 23.36 |
| EER93790 | Sorghum | nucleus | 20.6 | 22.69 |
| EER92613 | Sorghum | nucleus | 20.27 | 20.03 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | UniProt:A0A1Z5RKI6 | ncoils:Coil | InterPro:E3_UB_ligase_RBR |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 |
| InterPro:IBR_dom | InterPro:IPR013083 | EnsemblPlants:OQU83975 | ProteinID:OQU83975 | ProteinID:OQU83975.1 | PFAM:PF01485 |
| PANTHER:PTHR11685 | PANTHER:PTHR11685:SF216 | SMART:SM00647 | EnsemblPlantsGene:SORBI_3005G208600 | SUPFAM:SSF57850 | UniParc:UPI000B424DE0 |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:69526481..69528274
Molecular Weight (calculated)
67097.0 Da
IEP (calculated)
4.787
GRAVY (calculated)
-0.663
Length
597 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTAEGGKGR GRVRKKRSRD GGEGKNAAGI RCRVDEDYGD GEIDAGKTCR GEEDYGDGEI GAGKRRPFDE DDNDGRTGDD EGTGDCSINC DDETDGGGDS
101: TGQDFIYYYS NDDDDAETEV DDDANAVELA EKRYIVLSQD DIRARQEADT AEVAEVLSVP RGFAAVLLRH YKWRAMRVQD EWFSDDRRIR DAVGMPADDG
201: GVIVPTAHSR ERLVCAICFG TFPAGRTRSA ACSAHFYCDE CWRGYIRAAV EDGPRCLSLR CPDPSCSAAV VRELVDEVAD DAEEKARYAR FALWSFVDES
301: GGRVKWCPGR GCSRAVEFVG CAGDATEVFC ECTHGFCWSC GEEAHRPVSC ETVRAWLAKN VSDSETANWV LTNTKLCPKC RRPIEKNLGC MHMTCSTPCR
401: YEFCWVCLGP WPHRSGCRSS YQESGMDAAQ QRQQQAKASL DRYLYHYERW AVNAKSMQKA LADMDELKRS ELEKMAATLE IQVEDLEFLT MAYELIAYGR
501: RVTRWVYAYG YYLDPEAKRN LLDQLQDDAN RRLEDLHHAA EVERMKFCGG QGGSAMNDMY RAYKEQLVKL TKVTRNYFGN LVKAFETDLP EFNSVKK
101: TGQDFIYYYS NDDDDAETEV DDDANAVELA EKRYIVLSQD DIRARQEADT AEVAEVLSVP RGFAAVLLRH YKWRAMRVQD EWFSDDRRIR DAVGMPADDG
201: GVIVPTAHSR ERLVCAICFG TFPAGRTRSA ACSAHFYCDE CWRGYIRAAV EDGPRCLSLR CPDPSCSAAV VRELVDEVAD DAEEKARYAR FALWSFVDES
301: GGRVKWCPGR GCSRAVEFVG CAGDATEVFC ECTHGFCWSC GEEAHRPVSC ETVRAWLAKN VSDSETANWV LTNTKLCPKC RRPIEKNLGC MHMTCSTPCR
401: YEFCWVCLGP WPHRSGCRSS YQESGMDAAQ QRQQQAKASL DRYLYHYERW AVNAKSMQKA LADMDELKRS ELEKMAATLE IQVEDLEFLT MAYELIAYGR
501: RVTRWVYAYG YYLDPEAKRN LLDQLQDDAN RRLEDLHHAA EVERMKFCGG QGGSAMNDMY RAYKEQLVKL TKVTRNYFGN LVKAFETDLP EFNSVKK
001: MDSEEDMLDA HDMESGEDDF YSGGTDDCND SDDGEPDYGF VEEDADDSAM IASHRSQKNF CVLREEDIRR HQMDNIERVS VVLSITEVEA SILLRHFHWS
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
Arabidopsis Description
ARI7Probable E3 ubiquitin-protein ligase ARI7 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.