Factsheet for Os09t0559000-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G019640.1	Barley	cytosol, peroxisome, plastid	22.48	55.4
EES08942	Sorghum	cytosol	57.33	54.33
Zm00001d048683_P001	Maize	nucleus	59.05	52.99
OQU83976	Sorghum	cytosol	53.33	52.53
TraesCS6D01G402400.1	Wheat	nucleus	56.0	52.13
TraesCS6A01G417200.1	Wheat	nucleus	56.0	51.76
TraesCS6B01G472300.1	Wheat	nucleus	55.81	51.68
OQU83975	Sorghum	nucleus	56.95	50.08
HORVU3Hr1G049680.1	Barley	nucleus	34.1	49.31
HORVU5Hr1G089940.1	Barley	cytosol	29.52	46.55
EES08939	Sorghum	nucleus	57.14	45.66
HORVU5Hr1G089020.2	Barley	nucleus	51.81	44.88
Os04t0492100-01	Rice	nucleus	37.14	41.31
Os09t0559100-00	Rice	nucleus	14.86	39.59
Os09t0513800-01	Rice	cytosol, mitochondrion, nucleus	40.0	38.6
Os08t0540300-01	Rice	nucleus	44.19	38.22
Zm00001d007709_P003	Maize	nucleus	56.0	28.57
EES08947	Sorghum	nucleus	57.33	27.74
Os03t0625933-00	Rice	nucleus	16.19	25.84
Os03t0233500-01	Rice	nucleus	25.33	21.73
Os03t0626100-01	Rice	nucleus	23.24	21.4
Os03t0625800-01	Rice	cytosol	21.71	21.11

Protein Annotations

Gene3D:1.20.120.1750	MapMan:19.2.2.1.5.4.1	Gene3D:3.30.40.10	ProteinID:BAD45948.1	ProteinID:BAF25829.1	ProteinID:BAT09382.1
ncoils:Coil	InterPro:E3_UB_ligase_RBR	ProteinID:EAZ45650.1	GO:GO:0000151	GO:GO:0000209	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031624	GO:GO:0032436
GO:GO:0046872	GO:GO:0061630	InterPro:IBR_dom	InterPro:IPR001841	InterPro:IPR013083	EnsemblPlantsGene:Os09g0559000
EnsemblPlants:Os09t0559000-00	PFAM:PF01485	ScanProsite:PS00518	PFscan:PS50089	PANTHER:PTHR11685	PANTHER:PTHR11685:SF216
UniProt:Q653S8	SMART:SM00647	SUPFAM:SSF57850	UniParc:UPI000043A45D	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
InterPro:Znf_RING_CS	SEG:seg	:	:	:	:

Description

Zinc finger, RING-type domain containing protein. (Os09t0559000-00)

Coordinates

chr9:-:22220410..22221987

Molecular Weight (calculated)

58714.5 Da

IEP (calculated)

4.687

GRAVY (calculated)

-0.469

Length

525 amino acids

Sequence
(BLAST)

001: MESGYSDVDD DYFGDSDEDY GDDGDYMDDD GDDYGGQVVE ETEAPAMEKT YVVLTEDDVR ARQEEDIAKV CEVLSLSPGA AAVLLRLYRW RAVLLQEEWF
101: LDERRIRDAA GLLPADGGGG EVPARVNRRR LTCAICFDVF DTGGMRSAGC SHFYCVSCWR GYVRAAVGDG ARCLSLRCPD PSCPAAVVRE LVDAVADGED
201: RERFGWFALR SYVEESAGMR WCPGPGCSRA VEFVGGGDGE ESSEVFCSCG HGLCWRCGEE AHRPVSCKTV AKWVEKNSSE SETATWLLAH TKHCPKCRLP
301: IEKNLGCMHM TCRPPCLHEF CWICLKPWHG HAACSRYQPN GTVVALAGAN ADDERRRQAK ASLDRYLYHY ERWDANLKSL RVALRDMESL ERSELEAMAS
401: AAGVPATEMG FVTEAYEQVG EGRRVLGWAH AYGYYLDPDR DFTKRQLFEY LQEDANASLE RLHGCAERER RELFAAGADD KAAVDFDKYR AYREKLAGLT
501: RVTRQYFGNL VKAFETDLAE VSSSS

Best Arabidopsis Sequence Match ( AT2G31510.1 )
(BLAST)

001: MDSEEDMLDA HDMESGEDDF YSGGTDDCND SDDGEPDYGF VEEDADDSAM IASHRSQKNF CVLREEDIRR HQMDNIERVS VVLSITEVEA SILLRHFHWS
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL

Arabidopsis Description

ARI7Probable E3 ubiquitin-protein ligase ARI7 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.