Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G402400.1 | Wheat | nucleus | 94.19 | 94.86 |
| TraesCS6B01G472300.1 | Wheat | nucleus | 91.02 | 91.18 |
| Os09t0559000-00 | Rice | cytosol | 51.76 | 56.0 |
| OQU83976 | Sorghum | cytosol | 50.0 | 53.28 |
| Zm00001d048683_P001 | Maize | nucleus | 54.58 | 52.99 |
| EES08939 | Sorghum | nucleus | 53.7 | 46.42 |
| TraesCS4A01G376800.1 | Wheat | nucleus | 38.38 | 44.4 |
| TraesCS5A01G361400.1 | Wheat | nucleus | 44.37 | 42.64 |
| Os09t0559100-00 | Rice | nucleus | 12.85 | 37.06 |
| TraesCS5A01G298200.1 | Wheat | nucleus | 35.92 | 36.43 |
| TraesCS7A01G267200.4 | Wheat | nucleus | 37.85 | 35.66 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 36.97 | 35.65 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 36.44 | 35.14 |
| EES08947 | Sorghum | nucleus | 57.04 | 29.86 |
| Zm00001d007709_P003 | Maize | nucleus | 53.87 | 29.74 |
| TraesCS4A01G243200.1 | Wheat | nucleus | 20.95 | 21.72 |
| TraesCS4A01G061500.1 | Wheat | nucleus | 22.54 | 20.65 |
| TraesCS4A01G244200.1 | Wheat | nucleus | 19.01 | 20.15 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IBR_dom | InterPro:IPR013083 | PFAM:PF01485 | PANTHER:PTHR11685 |
| PANTHER:PTHR11685:SF216 | SMART:SM00647 | SUPFAM:SSF57850 | EnsemblPlantsGene:TraesCS6A01G417200 | EnsemblPlants:TraesCS6A01G417200.1 | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:-:615706951..615708657
Molecular Weight (calculated)
63054.6 Da
IEP (calculated)
5.551
GRAVY (calculated)
-0.513
Length
568 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGYNSVNG ESSSNKRGER AGQGSCNKRR EMDDSDWMED DGEDCIYEYD DDDDSGSVYD DDEYMSDAEE TRVHVAPVTY VVLTEDDVLK RQADDTAGIS
101: EVLSIPPAFA AFLLRRYKWM PSNLQDDWFS DDRRVRDAAG LPADGSAPVA TALSPRPLIC AICFDRYPAG ATRSASCSSH FYCDGCWRGY VGAAVGDGPR
201: CLSLRCPDPA CSAAVVGGLV DAVAGAADRE RYVRFALRSY VEESGGRIKW CPGAGCSHAV EFVGCAGYDA TDVFCKCRHG FCWSCGEEAH RPVSCGTVRA
301: WLAKNKSDSE TANWVLANTK VCPKCRCAIE KNNGCNHMSC PCGHHFCWLC FKPAGTQEHY ACQGDIYRPR RDTTSSKAAG GSKAAVETKE EATARQARAS
401: LDRYLFHYER WAGNLKSLEK AHQDMDKLER SELEEMAAAA GVKAVTELEF VMEAYKEIVY GRRVLRWAHA YGYYLDPERD GKKRELFDYL QAEANASLEQ
501: LHKCAEVDRK KIFPSHGEGE AADVSMVKKV FKDYRDKMVN LTVASRTFMG NLVKAFETNL PEVGKMNW
101: EVLSIPPAFA AFLLRRYKWM PSNLQDDWFS DDRRVRDAAG LPADGSAPVA TALSPRPLIC AICFDRYPAG ATRSASCSSH FYCDGCWRGY VGAAVGDGPR
201: CLSLRCPDPA CSAAVVGGLV DAVAGAADRE RYVRFALRSY VEESGGRIKW CPGAGCSHAV EFVGCAGYDA TDVFCKCRHG FCWSCGEEAH RPVSCGTVRA
301: WLAKNKSDSE TANWVLANTK VCPKCRCAIE KNNGCNHMSC PCGHHFCWLC FKPAGTQEHY ACQGDIYRPR RDTTSSKAAG GSKAAVETKE EATARQARAS
401: LDRYLFHYER WAGNLKSLEK AHQDMDKLER SELEEMAAAA GVKAVTELEF VMEAYKEIVY GRRVLRWAHA YGYYLDPERD GKKRELFDYL QAEANASLEQ
501: LHKCAEVDRK KIFPSHGEGE AADVSMVKKV FKDYRDKMVN LTVASRTFMG NLVKAFETNL PEVGKMNW
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.