Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G417200.1 | Wheat | nucleus | 94.86 | 94.19 |
| TraesCS6B01G472300.1 | Wheat | nucleus | 92.38 | 91.89 |
| Os09t0559000-00 | Rice | cytosol | 52.13 | 56.0 |
| OQU83976 | Sorghum | cytosol | 49.82 | 52.72 |
| Zm00001d048683_P001 | Maize | nucleus | 54.61 | 52.65 |
| EES08939 | Sorghum | nucleus | 54.43 | 46.73 |
| TraesCS7D01G073800.1 | Wheat | nucleus | 39.18 | 45.01 |
| TraesCS5D01G370300.1 | Wheat | nucleus | 44.68 | 42.35 |
| Os09t0559100-00 | Rice | nucleus | 13.12 | 37.56 |
| TraesCS5D01G305000.1 | Wheat | nucleus | 36.35 | 36.48 |
| TraesCS7D01G267600.2 | Wheat | nucleus | 37.94 | 35.43 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 36.88 | 35.31 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 36.7 | 35.14 |
| EES08947 | Sorghum | nucleus | 57.8 | 30.05 |
| Zm00001d007709_P003 | Maize | nucleus | 54.61 | 29.93 |
| TraesCS4D01G070400.1 | Wheat | nucleus | 21.81 | 23.03 |
| TraesCS4D01G070600.1 | Wheat | nucleus | 20.57 | 21.56 |
| TraesCS4D01G238400.2 | Wheat | nucleus | 22.87 | 20.81 |
| TraesCS4D01G069600.1 | Wheat | nucleus | 19.33 | 20.41 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IBR_dom | InterPro:IPR013083 | PFAM:PF01485 | PANTHER:PTHR11685 |
| PANTHER:PTHR11685:SF216 | SMART:SM00647 | SUPFAM:SSF57850 | EnsemblPlantsGene:TraesCS6D01G402400 | EnsemblPlants:TraesCS6D01G402400.1 | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6D:-:470884631..470886325
Molecular Weight (calculated)
62866.6 Da
IEP (calculated)
5.558
GRAVY (calculated)
-0.516
Length
564 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGYNSVDG ESSCNKRGER DGQSSCNKRR EIDSDCMEME DDGEDCIYEY DDDDDSGGVY DDDEYMSDAE ETRVHVAPVT YVVLTEDDVL KRQADDTAGI
101: AEVLSIPPAF AALLLRRYKW MPSNLQDDWF SDDRRVRDSA GLPSGGGAPV VATALSPRPL ICAICFDRYP AGATRSASCS SHFYCSGCWR GYVGAAVGDG
201: PRCLSLRCPD PACSAAVVRG LIDAVAGAAD RERYARFALR SYVEESGGRI KWCPGAGCSH AVEFVGCTGY DATDVFCKCR HGFCWSCGEE AHRPVSCGTV
301: RAWLAKNKSD SETANWMLAN TKVCPKCRRA IEKNNGCNHM SCPCGHHFCW LCFKPAGTQE HYACEGDIYR PRRDATGSKA AVETKEEATA RQARASLDRY
401: LFHYERWAGN LKSLEKAHQD MDKLERSELE EMAAAAGVKA VTELEFVMEA YKEIVYGRRV LRWAHAYGYY LDPERDSKKR ELFDYLQAEA NASLEQLHKC
501: AEVDRKKIFP SHGEGEAADV SMVKKVFKDY RERMVNLTVA SRTFMGNLVK AFETNLPEVG KMNW
101: AEVLSIPPAF AALLLRRYKW MPSNLQDDWF SDDRRVRDSA GLPSGGGAPV VATALSPRPL ICAICFDRYP AGATRSASCS SHFYCSGCWR GYVGAAVGDG
201: PRCLSLRCPD PACSAAVVRG LIDAVAGAAD RERYARFALR SYVEESGGRI KWCPGAGCSH AVEFVGCTGY DATDVFCKCR HGFCWSCGEE AHRPVSCGTV
301: RAWLAKNKSD SETANWMLAN TKVCPKCRRA IEKNNGCNHM SCPCGHHFCW LCFKPAGTQE HYACEGDIYR PRRDATGSKA AVETKEEATA RQARASLDRY
401: LFHYERWAGN LKSLEKAHQD MDKLERSELE EMAAAAGVKA VTELEFVMEA YKEIVYGRRV LRWAHAYGYY LDPERDSKKR ELFDYLQAEA NASLEQLHKC
501: AEVDRKKIFP SHGEGEAADV SMVKKVFKDY RERMVNLTVA SRTFMGNLVK AFETNLPEVG KMNW
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.