Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G361400.1 | Wheat | nucleus | 96.47 | 97.12 |
| TraesCS5B01G364000.1 | Wheat | nucleus | 95.8 | 95.8 |
| HORVU3Hr1G019640.1 | Barley | cytosol, peroxisome, plastid | 31.43 | 87.79 |
| HORVU5Hr1G089020.2 | Barley | nucleus | 86.39 | 84.82 |
| HORVU5Hr1G089940.1 | Barley | cytosol | 46.89 | 83.78 |
| HORVU3Hr1G049680.1 | Barley | nucleus | 48.74 | 79.89 |
| TraesCS7D01G073800.1 | Wheat | nucleus | 44.71 | 54.18 |
| TraesCS6D01G402400.1 | Wheat | nucleus | 42.35 | 44.68 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 38.82 | 39.22 |
| TraesCS7D01G267600.2 | Wheat | nucleus | 39.66 | 39.07 |
| TraesCS5D01G305000.1 | Wheat | nucleus | 36.64 | 38.79 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 38.15 | 38.54 |
| TraesCS4D01G069600.1 | Wheat | nucleus | 21.51 | 23.97 |
| TraesCS4D01G070400.1 | Wheat | nucleus | 20.67 | 23.03 |
| TraesCS4D01G070600.1 | Wheat | nucleus | 19.83 | 21.93 |
| TraesCS4D01G238400.2 | Wheat | nucleus | 21.85 | 20.97 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IBR_dom | InterPro:IPR013083 | PFAM:PF01485 | ScanProsite:PS00518 |
| PANTHER:PTHR11685 | PANTHER:PTHR11685:SF216 | SMART:SM00647 | SUPFAM:SSF57850 | EnsemblPlantsGene:TraesCS5D01G370300 | EnsemblPlants:TraesCS5D01G370300.1 |
| InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5D:+:445306840..445308627
Molecular Weight (calculated)
66381.2 Da
IEP (calculated)
4.303
GRAVY (calculated)
-0.632
Length
595 amino acids
Sequence
(BLAST)
(BLAST)
001: MALTSDNEEE YYSSPEEAEE AGDDDDRMSF RTASNESDND AGAGDDADDD CLYGDSDGDG DDGMYDEYEG DEEEGLEEVD EEGGVLDEMR FTATQYAVLT
101: MDEVRARQEE HTARVADLIA LPPALAAAVL RHFKWSAQGV WERWFSDEHK VRDAVGLPAD GDAVSVAVND APLTCYICFD AHGPGEMRSA GCAHFYCRGC
201: WSGYVRAAVG DGARCLSIRC PDMGCSAAVV RDLVDDVADA DDAKRYGEFL VRSYVEESKR LRWCPAPGCD RAVEFDGEKC TVQLDAWCAC GHGFCLVCGE
301: EAHRPVACDT VRGWLDKNRS DSETAQWVLA NTKHCPECRR PIEKNQGCMH MTCSPPCKHQ FCWLCLGPWG KHDGGNYNCN TYNAARAEGK YTEEELRRAQ
401: AKASVDRYLH YYERWGAHER SRQKALEDTA ALGKDGAQRE AVAAAFGVVE TELDFLEEAY RQVAECRRML RWTYAFGYYL DDPAKRDLFE DLQSQADKSL
501: ERLHECAEKD RTSLVAEAAG EHGAVADKYL EFRPRLSSLT AVARNHFENM ARAFRDGLAE VEVDPAVAAR RAAATPPPPP LDDDDDEDFF EELRM
101: MDEVRARQEE HTARVADLIA LPPALAAAVL RHFKWSAQGV WERWFSDEHK VRDAVGLPAD GDAVSVAVND APLTCYICFD AHGPGEMRSA GCAHFYCRGC
201: WSGYVRAAVG DGARCLSIRC PDMGCSAAVV RDLVDDVADA DDAKRYGEFL VRSYVEESKR LRWCPAPGCD RAVEFDGEKC TVQLDAWCAC GHGFCLVCGE
301: EAHRPVACDT VRGWLDKNRS DSETAQWVLA NTKHCPECRR PIEKNQGCMH MTCSPPCKHQ FCWLCLGPWG KHDGGNYNCN TYNAARAEGK YTEEELRRAQ
401: AKASVDRYLH YYERWGAHER SRQKALEDTA ALGKDGAQRE AVAAAFGVVE TELDFLEEAY RQVAECRRML RWTYAFGYYL DDPAKRDLFE DLQSQADKSL
501: ERLHECAEKD RTSLVAEAAG EHGAVADKYL EFRPRLSSLT AVARNHFENM ARAFRDGLAE VEVDPAVAAR RAAATPPPPP LDDDDDEDFF EELRM
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.