Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G370300.1 | Wheat | nucleus | 97.12 | 96.47 |
| TraesCS5B01G364000.1 | Wheat | nucleus | 96.11 | 95.46 |
| HORVU3Hr1G019640.1 | Barley | cytosol, peroxisome, plastid | 31.3 | 86.85 |
| HORVU5Hr1G089020.2 | Barley | nucleus | 85.79 | 83.66 |
| HORVU5Hr1G089940.1 | Barley | cytosol | 47.04 | 83.48 |
| HORVU3Hr1G049680.1 | Barley | nucleus | 49.07 | 79.89 |
| TraesCS4A01G376800.1 | Wheat | nucleus | 45.01 | 54.18 |
| TraesCS6A01G417200.1 | Wheat | nucleus | 42.64 | 44.37 |
| TraesCS5A01G298200.1 | Wheat | nucleus | 36.89 | 38.93 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 38.75 | 38.88 |
| TraesCS7A01G267200.4 | Wheat | nucleus | 39.59 | 38.81 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 38.24 | 38.37 |
| TraesCS4A01G244200.1 | Wheat | nucleus | 20.98 | 23.13 |
| TraesCS4A01G243200.1 | Wheat | nucleus | 20.64 | 22.26 |
| TraesCS4A01G061500.1 | Wheat | nucleus | 22.34 | 21.29 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF01485 |
| ScanProsite:PS00518 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF216 | SMART:SM00647 | SUPFAM:SSF57850 |
| EnsemblPlantsGene:TraesCS5A01G361400 | EnsemblPlants:TraesCS5A01G361400.1 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg |
Description
No Description!
Coordinates
chr5A:+:562856383..562858158
Molecular Weight (calculated)
66191.0 Da
IEP (calculated)
4.310
GRAVY (calculated)
-0.652
Length
591 amino acids
Sequence
(BLAST)
(BLAST)
001: MALTSDSEEE YYSSPEEGGD DDDRLSFRTA SNESDNDAGA GDDADDDCLY GDSDGDDDGM YDEYEGDEEE GLEEVDEEGE VLDEMRFTAT QYAVLTMDEV
101: RARQEEHTAR VADLIALPPG LAAAVLRHFK WSAQGVWERW FSDEHKVRDA VGLPPDGDAV SVAVNDAPLT CYICFDAHAP GEMRSAGCAH FYCRGCWSGY
201: VRAAVGDGAR CLSIRCPDMG CSAAVVRDLV DDVADADDAK RYGEFLVRSY VEESKRIRWC PAPGCDRAVE FDGEKCTVQL DAWCACGHGF CLACGEEAHR
301: PVACDTVREW LEKNRSDSET AQWVLANTKH CPECRRPIEK NQGCMHMTCS PPCKHQFCWL CLGPWDKHDG GNYNCNTYNT ARAEGKYTEE ELRRAQAKAS
401: VDRYLHYYER WGAHERSRQK ALEDTAALGK DGAQREAVAA AFGVVETELD FLEEAYRQVA ECRRMLRWTY AFGYYLDDPA KRDLFEDLQS QADKSLERLH
501: ECAEKDRAKL VAEAAGEHGA VADKYLEFRP RLSSLTTVAR NHFENMARAF RDGLAEVEVD PAVAARRAAA APPPPPLDDD DDEDFFEELR M
101: RARQEEHTAR VADLIALPPG LAAAVLRHFK WSAQGVWERW FSDEHKVRDA VGLPPDGDAV SVAVNDAPLT CYICFDAHAP GEMRSAGCAH FYCRGCWSGY
201: VRAAVGDGAR CLSIRCPDMG CSAAVVRDLV DDVADADDAK RYGEFLVRSY VEESKRIRWC PAPGCDRAVE FDGEKCTVQL DAWCACGHGF CLACGEEAHR
301: PVACDTVREW LEKNRSDSET AQWVLANTKH CPECRRPIEK NQGCMHMTCS PPCKHQFCWL CLGPWDKHDG GNYNCNTYNT ARAEGKYTEE ELRRAQAKAS
401: VDRYLHYYER WGAHERSRQK ALEDTAALGK DGAQREAVAA AFGVVETELD FLEEAYRQVA ECRRMLRWTY AFGYYLDDPA KRDLFEDLQS QADKSLERLH
501: ECAEKDRAKL VAEAAGEHGA VADKYLEFRP RLSSLTTVAR NHFENMARAF RDGLAEVEVD PAVAARRAAA APPPPPLDDD DDEDFFEELR M
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.