Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5A01G361400.1 | Wheat | nucleus | 95.46 | 96.11 |
TraesCS5D01G370300.1 | Wheat | nucleus | 95.8 | 95.8 |
HORVU3Hr1G019640.1 | Barley | cytosol, peroxisome, plastid | 30.92 | 86.39 |
HORVU5Hr1G089020.2 | Barley | nucleus | 85.88 | 84.32 |
HORVU5Hr1G089940.1 | Barley | cytosol | 46.39 | 82.88 |
HORVU3Hr1G049680.1 | Barley | nucleus | 48.4 | 79.34 |
TraesCS6B01G472300.1 | Wheat | nucleus | 43.03 | 45.15 |
TraesCS7B01G165100.2 | Wheat | nucleus | 39.83 | 39.24 |
TraesCS2B01G368000.2 | Wheat | nucleus | 38.66 | 39.05 |
TraesCS6B01G245900.2 | Wheat | nucleus | 38.32 | 38.84 |
TraesCS5B01G297300.1 | Wheat | nucleus | 36.47 | 38.61 |
TraesCS4B01G070800.1 | Wheat | nucleus | 21.68 | 24.07 |
TraesCS4B01G071700.1 | Wheat | nucleus | 20.5 | 22.55 |
TraesCS4B01G071800.1 | Wheat | nucleus | 20.5 | 22.22 |
TraesCS4B01G236900.1 | Wheat | nucleus | 21.85 | 20.97 |
Protein Annotations
Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0004842 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
GO:GO:0016740 | GO:GO:0019538 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF01485 |
ScanProsite:PS00518 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF216 | SMART:SM00647 | SUPFAM:SSF57850 |
EnsemblPlantsGene:TraesCS5B01G364000 | EnsemblPlants:TraesCS5B01G364000.1 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg |
Description
No Description!
Coordinates
chr5B:+:542934945..542936732
Molecular Weight (calculated)
66403.4 Da
IEP (calculated)
4.377
GRAVY (calculated)
-0.629
Length
595 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTGDNEEE YYSSPEEAEG AAADDDRMSF RTASNESDND AGADDDADAD DCLYGNSDGD DDGMYDEYDG DEEEGLEEVD EEGGVLDEMR FTATQYAVLT
101: MDEVRARQEE HTARVADLIA LPPALAAAVL RHFKWSAQGV WERWFSDEHK VRDAVGLPAD GDAVSVAVND APLTCYICFD AHAPGEMRSA GCAHFYCRGC
201: WSGYVRAAVG DGARCLSIRC PDMACSAAVV RDLVDEVADA DDAKRYGEFL VRSYVEESKR IRWCPAPGCD RAVEFDGEKC TVQLDAWCAC GHGFCLACGE
301: EAHRPVACDT VREWLEKNRS DSETAQWVLA NTKHCPECRR PIEKNQGCMH MTCSPPCKHQ FCWLCLGPWG KHDGGNYNCN TYNAARAEGK YTKEELRRAQ
401: AKASVDRYLH YYERWGAHER SRQKALEDKV ALGKDGAQRE AVAAAFGVVE TELDFLEEAY RQVAECRRML RWTYAFGYYL DDPAKRDLFE DLQSQADKSL
501: ERLHECAEKD RAKLVAEAGG EHGAVADKYL EFRPKLSSLT TVARNHFENM ARAFRDGLAE VEVDPAVAAR RAAAAPPPPP LDDDDDEDFF EELRM
101: MDEVRARQEE HTARVADLIA LPPALAAAVL RHFKWSAQGV WERWFSDEHK VRDAVGLPAD GDAVSVAVND APLTCYICFD AHAPGEMRSA GCAHFYCRGC
201: WSGYVRAAVG DGARCLSIRC PDMACSAAVV RDLVDEVADA DDAKRYGEFL VRSYVEESKR IRWCPAPGCD RAVEFDGEKC TVQLDAWCAC GHGFCLACGE
301: EAHRPVACDT VREWLEKNRS DSETAQWVLA NTKHCPECRR PIEKNQGCMH MTCSPPCKHQ FCWLCLGPWG KHDGGNYNCN TYNAARAEGK YTKEELRRAQ
401: AKASVDRYLH YYERWGAHER SRQKALEDKV ALGKDGAQRE AVAAAFGVVE TELDFLEEAY RQVAECRRML RWTYAFGYYL DDPAKRDLFE DLQSQADKSL
501: ERLHECAEKD RAKLVAEAGG EHGAVADKYL EFRPKLSSLT TVARNHFENM ARAFRDGLAE VEVDPAVAAR RAAAAPPPPP LDDDDDEDFF EELRM
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.