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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G361400.1 Wheat nucleus 95.46 96.11
TraesCS5D01G370300.1 Wheat nucleus 95.8 95.8
HORVU3Hr1G019640.1 Barley cytosol, peroxisome, plastid 30.92 86.39
HORVU5Hr1G089020.2 Barley nucleus 85.88 84.32
HORVU5Hr1G089940.1 Barley cytosol 46.39 82.88
HORVU3Hr1G049680.1 Barley nucleus 48.4 79.34
TraesCS6B01G472300.1 Wheat nucleus 43.03 45.15
TraesCS7B01G165100.2 Wheat nucleus 39.83 39.24
TraesCS2B01G368000.2 Wheat nucleus 38.66 39.05
TraesCS6B01G245900.2 Wheat nucleus 38.32 38.84
TraesCS5B01G297300.1 Wheat nucleus 36.47 38.61
TraesCS4B01G070800.1 Wheat nucleus 21.68 24.07
TraesCS4B01G071700.1 Wheat nucleus 20.5 22.55
TraesCS4B01G071800.1 Wheat nucleus 20.5 22.22
TraesCS4B01G236900.1 Wheat nucleus 21.85 20.97
Protein Annotations
Gene3D:1.20.120.1750MapMan:19.2.2.1.5.4.1Gene3D:3.30.40.10InterPro:E3_UB_ligase_RBRGO:GO:0003674GO:GO:0003824
GO:GO:0004842GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016567
GO:GO:0016740GO:GO:0019538InterPro:IBR_domInterPro:IPR001841InterPro:IPR013083PFAM:PF01485
ScanProsite:PS00518PFscan:PS50089PANTHER:PTHR11685PANTHER:PTHR11685:SF216SMART:SM00647SUPFAM:SSF57850
EnsemblPlantsGene:TraesCS5B01G364000EnsemblPlants:TraesCS5B01G364000.1InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDInterPro:Znf_RING_CSSEG:seg
Description
No Description!
Coordinates
chr5B:+:542934945..542936732
Molecular Weight (calculated)
66403.4 Da
IEP (calculated)
4.377
GRAVY (calculated)
-0.629
Length
595 amino acids
Sequence
(BLAST)
001: MASTGDNEEE YYSSPEEAEG AAADDDRMSF RTASNESDND AGADDDADAD DCLYGNSDGD DDGMYDEYDG DEEEGLEEVD EEGGVLDEMR FTATQYAVLT
101: MDEVRARQEE HTARVADLIA LPPALAAAVL RHFKWSAQGV WERWFSDEHK VRDAVGLPAD GDAVSVAVND APLTCYICFD AHAPGEMRSA GCAHFYCRGC
201: WSGYVRAAVG DGARCLSIRC PDMACSAAVV RDLVDEVADA DDAKRYGEFL VRSYVEESKR IRWCPAPGCD RAVEFDGEKC TVQLDAWCAC GHGFCLACGE
301: EAHRPVACDT VREWLEKNRS DSETAQWVLA NTKHCPECRR PIEKNQGCMH MTCSPPCKHQ FCWLCLGPWG KHDGGNYNCN TYNAARAEGK YTKEELRRAQ
401: AKASVDRYLH YYERWGAHER SRQKALEDKV ALGKDGAQRE AVAAAFGVVE TELDFLEEAY RQVAECRRML RWTYAFGYYL DDPAKRDLFE DLQSQADKSL
501: ERLHECAEKD RAKLVAEAGG EHGAVADKYL EFRPKLSSLT TVARNHFENM ARAFRDGLAE VEVDPAVAAR RAAAAPPPPP LDDDDDEDFF EELRM
Best Arabidopsis Sequence Match ( AT1G05890.1 )
(BLAST)
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.