Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G165100.2 | Wheat | nucleus | 99.17 | 99.01 |
| TraesCS7D01G267600.2 | Wheat | nucleus | 98.01 | 97.85 |
| HORVU7Hr1G056040.5 | Barley | nucleus, plastid | 92.7 | 84.19 |
| HORVU7Hr1G056020.3 | Barley | cytosol | 37.81 | 80.85 |
| Os08t0540300-01 | Rice | nucleus | 81.26 | 80.72 |
| EES15269 | Sorghum | nucleus | 79.1 | 80.03 |
| Zm00001d052709_P002 | Maize | plastid | 60.53 | 74.34 |
| Zm00001d031694_P003 | Maize | nucleus | 77.28 | 71.25 |
| TraesCS5A01G298200.1 | Wheat | nucleus | 62.19 | 66.96 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 58.87 | 60.27 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 57.05 | 58.4 |
| TraesCS4A01G376800.1 | Wheat | nucleus | 34.49 | 42.36 |
| TraesCS5A01G361400.1 | Wheat | nucleus | 38.81 | 39.59 |
| TraesCS6A01G417200.1 | Wheat | nucleus | 35.66 | 37.85 |
| TraesCS4A01G243200.1 | Wheat | nucleus | 22.72 | 25.0 |
| TraesCS4A01G061500.1 | Wheat | nucleus | 25.54 | 24.84 |
| TraesCS4A01G244200.1 | Wheat | nucleus | 21.06 | 23.69 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:2.20.28.140 | Gene3D:3.30.40.10 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR001876 |
| InterPro:IPR013083 | PFAM:PF01485 | ScanProsite:PS01358 | PFscan:PS50089 | PFscan:PS50199 | PANTHER:PTHR11685 |
| PANTHER:PTHR11685:SF154 | SMART:SM00547 | SMART:SM00647 | SUPFAM:SSF57850 | SUPFAM:SSF90209 | EnsemblPlantsGene:TraesCS7A01G267200 |
| EnsemblPlants:TraesCS7A01G267200.4 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RanBP2 | InterPro:Znf_RanBP2_sf | SEG:seg |
Description
No Description!
Coordinates
chr7A:-:270273589..270280456
Molecular Weight (calculated)
68246.2 Da
IEP (calculated)
4.675
GRAVY (calculated)
-0.656
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSDSEMPVA SDEEMVDDED YYYYSDEGEG DDGDASGGGA SGDEDVSAGD YEGREAEGSD EAVSTREQRY IVLSEKDISE RQEEDISEVS ALLLIPREEA
101: SVLLHHYKWD ISKVNDEWFS DEDKVRGIVG LLMNGTDIHN SRKLFWLQLT CGICFEGYSS DMMSSAGCAH FYCHECWEGY ISAAVSQGPG CLSLRCPDPS
201: CSAIVLQGMI NKLGKHEDKE KYARFALRAY VESRKKTKWC PAPDCTCAVE FVSDVNYDVS CNCTFRFCWN CTEEAHRPVN CETVSKWILK NSAESENMNW
301: ILANSKPCPK CQRPIEKNQG CMHMTCTPPC KFEFCWLCLG SWVEHGERTG GFYACNRYES AKKEGVYDEA EARRERAKHS LERYMHYYER WASNQTSRQK
401: AISDLQKAEK EQLAKLTDIY GIPETQLKFI IEAWSQIIEC RRVLQWTYAY GYYLEDKVKS GFFEYLQGEA ESGLERLHQC AEKDLLAFLP FSKHDTTEDH
501: PSPAEFGEFR VKLAGLTSIT RNYFENLVRA LEDGLEDVQC AGEAATSSKA TNSKKGGAKG KAAKKQPSRS SSDHSDDTWP CERCTFLNPS SADACTACDK
601: QRY
101: SVLLHHYKWD ISKVNDEWFS DEDKVRGIVG LLMNGTDIHN SRKLFWLQLT CGICFEGYSS DMMSSAGCAH FYCHECWEGY ISAAVSQGPG CLSLRCPDPS
201: CSAIVLQGMI NKLGKHEDKE KYARFALRAY VESRKKTKWC PAPDCTCAVE FVSDVNYDVS CNCTFRFCWN CTEEAHRPVN CETVSKWILK NSAESENMNW
301: ILANSKPCPK CQRPIEKNQG CMHMTCTPPC KFEFCWLCLG SWVEHGERTG GFYACNRYES AKKEGVYDEA EARRERAKHS LERYMHYYER WASNQTSRQK
401: AISDLQKAEK EQLAKLTDIY GIPETQLKFI IEAWSQIIEC RRVLQWTYAY GYYLEDKVKS GFFEYLQGEA ESGLERLHQC AEKDLLAFLP FSKHDTTEDH
501: PSPAEFGEFR VKLAGLTSIT RNYFENLVRA LEDGLEDVQC AGEAATSSKA TNSKKGGAKG KAAKKQPSRS SSDHSDDTWP CERCTFLNPS SADACTACDK
601: QRY
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.