Factsheet for HORVU7Hr1G056040.5

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

mitochondrion 1
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G165100.2	Wheat	nucleus	84.64	93.05
TraesCS7D01G267600.2	Wheat	nucleus	84.49	92.88
TraesCS7A01G267200.4	Wheat	nucleus	84.19	92.7
HORVU7Hr1G056020.3	Barley	cytosol	35.24	82.98
Os08t0540300-01	Rice	nucleus	73.19	80.07
EES15269	Sorghum	nucleus	70.78	78.86
Zm00001d052709_P002	Maize	plastid	54.67	73.93
Zm00001d031694_P003	Maize	nucleus	69.43	70.49
HORVU5Hr1G078470.2	Barley	nucleus	53.61	63.8
HORVU6Hr1G055260.4	Barley	nucleus	50.45	56.88
HORVU2Hr1G085060.3	Barley	cytosol	50.15	49.78
HORVU3Hr1G049680.1	Barley	nucleus	24.25	44.35
HORVU5Hr1G089940.1	Barley	cytosol	21.84	43.54
HORVU3Hr1G019640.1	Barley	cytosol, peroxisome, plastid	13.86	43.19
HORVU5Hr1G089020.2	Barley	nucleus	35.24	38.61
HORVU4Hr1G066180.1	Barley	nucleus	23.19	24.84
HORVU4Hr1G011770.1	Barley	nucleus	19.43	24.02
HORVU4Hr1G011910.1	Barley	cytosol, plastid	20.78	22.55
HORVU1Hr1G018020.1	Barley	cytosol	4.52	16.3
HORVU7Hr1G068450.2	Barley	nucleus	5.57	14.45

Protein Annotations

Gene3D:1.20.120.1750	MapMan:19.2.2.1.5.4.1	Gene3D:2.20.28.140	Gene3D:3.30.40.10	UniProt:A0A287WKW5	ncoils:Coil
InterPro:E3_UB_ligase_RBR	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
GO:GO:0046872	EnsemblPlantsGene:HORVU7Hr1G056040	EnsemblPlants:HORVU7Hr1G056040.5	InterPro:IBR_dom	InterPro:IPR001841	InterPro:IPR001876
InterPro:IPR013083	PFAM:PF01485	ScanProsite:PS01358	PFscan:PS50089	PFscan:PS50199	PANTHER:PTHR11685
PANTHER:PTHR11685:SF154	SMART:SM00547	SMART:SM00647	SUPFAM:SSF57850	SUPFAM:SSF90209	UniParc:UPI000B479EEF
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf	SEG:seg	:

Description

RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A287WKW5]

Coordinates

chrchr7H:-:231092987..231101037

Molecular Weight (calculated)

74953.5 Da

IEP (calculated)

4.995

GRAVY (calculated)

-0.610

Length

664 amino acids

Sequence
(BLAST)

001: LGKPRKDSLE NPASPRCRCR LAHATPSVSH IFLTASYPAR PAPPTSPEPY LLPGRAPGHF RPIRRSSDLA SAMDSDSEMP VASDEEMVDD EDYYYCSDEG
101: ECDDGDASGG AASGEEDLLA GGYEGQEAEG SDEAVSRREQ RYIVLTEKDI SERQEEDISE VSALLFIPRE EASVLLHHYK WDISKLNDEW FSDEEKVRGI
201: VGLLMNGTDF HNLRKLTCGI CFEGYSSDMM SSAGCAHFYC HECWEGYISA AVSQGPGCLS LRCPDPSCRA IVLEGMINKL GKHEDREKYA RFALRAYVES
301: GKKTKWCPAP DCTCAVEFVS DVNYDVSCNC TFRFCWNCTE EAHRPVNCRT VSMWILKNSA ESENMNWILA NSKPCPKCQR PIEKNQGCMH MTCTPPCKFE
401: FCWLCLGSWV EHGERTGGFY ACNRYESAKK EGVYDEAEAR RERAKHSLER YMHYYERWAS NQTSRQKALA DLQKAEKEQL AKLTEIYGIP ETQLKFIIEA
501: WSQQIIECRR VLQWTYAYGY YLDDKVKSEF FEYLQGEAES GLERLHQCAE KDLLGFLPFS KHDTTEDHPS PAEFGEFRVK LAGLTSITRN YFENLVRALE
601: DGLEDVHCAA TSSKATNSKK AGGKGKAASI SSSDHSDDTW PCERCTFLNP SSVDACTACD KQRY

Best Arabidopsis Sequence Match ( AT1G05890.1 )
(BLAST)

001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN

Arabidopsis Description

ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.