Factsheet for Zm00001d031694_P003

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15269	Sorghum	nucleus	85.93	94.3
Zm00001d052709_P002	Maize	plastid	62.23	82.89
Os08t0540300-01	Rice	nucleus	74.77	80.56
TraesCS7B01G165100.2	Wheat	nucleus	71.41	77.32
TraesCS7A01G267200.4	Wheat	nucleus	71.25	77.28
TraesCS7D01G267600.2	Wheat	nucleus	70.95	76.82
HORVU7Hr1G056020.3	Barley	cytosol	30.73	71.28
HORVU7Hr1G056040.5	Barley	nucleus, plastid	70.49	69.43
Zm00001d003207_P001	Maize	nucleus	53.67	59.59
Zm00001d025750_P011	Maize	extracellular	53.67	59.59
Zm00001d046141_P001	Maize	cytosol	19.57	45.07
Zm00001d048683_P001	Maize	nucleus	32.57	36.41
Zm00001d013716_P002	Maize	nucleus	21.1	25.84
Zm00001d028285_P003	Maize	nucleus	23.24	24.52
Zm00001d007709_P003	Maize	nucleus	34.56	21.96
Zm00001d048017_P003	Maize	nucleus	22.94	19.61

Protein Annotations

Gene3D:1.20.120.1750	MapMan:19.2.2.1.5.4.1	Gene3D:2.20.28.140	Gene3D:3.30.40.10	UniProt:A0A1D6KKQ6	InterPro:E3_UB_ligase_RBR
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0016874	GO:GO:0019538
GO:GO:0046872	InterPro:IBR_dom	InterPro:IPR001841	InterPro:IPR001876	InterPro:IPR013083	ProteinID:ONM03495.1
PFAM:PF01485	ScanProsite:PS01358	PFscan:PS50089	PFscan:PS50199	PANTHER:PTHR11685	PANTHER:PTHR11685:SF154
SMART:SM00547	SMART:SM00647	SUPFAM:SSF57850	SUPFAM:SSF90209	UniParc:UPI000844B376	EnsemblPlantsGene:Zm00001d031694
EnsemblPlants:Zm00001d031694_P003	EnsemblPlants:Zm00001d031694_T003	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf
SEG:seg	:	:	:	:	:

Description

Probable E3 ubiquitin-protein ligase ARI5

Coordinates

chr1:+:198706330..198713467

Molecular Weight (calculated)

73957.6 Da

IEP (calculated)

4.760

GRAVY (calculated)

-0.478

Length

654 amino acids

Sequence
(BLAST)

001: MDSDVEMNAA SDEEVMDDED YYDYCYSDVG DDGDGGSEEE LVPVDYDEGL EAEGTDEVVS RREQTFVVLN EEVISERQEE DVSKVSAVLL ITREEACALL
101: HHYKWNISKL SDEWFADEEK VRHTVGLLLN GNHEPGSRKA RFTFHISMLF LSKQKQHLTC GICFEGYSSD TMSSAGCAHF YCHECWEGYI SAAIGGGPGC
201: LSLRCPDPSC SAMVLQGMVN ELAKDEDKAK YARFLLRAYV EGSKKTKWCP APDCTCAVEF LGDENYDVSC NCKFSFCWNC TEEAHRPVNC ETVSKWILKN
301: SAESENMNWF VAGSGLAFDM ILANSKPCPK CKRPIEKNQG CMHMTCTPPC KFEFCWLCLG AWSDHGERTG GFYACNRYES AKKEGVYDET ESRRERAKNS
401: LERYMHYYER WASNQTSRQK AQADLLKAEK DQLANLTYIY GIPETQLKFI IEAWSQIIEC RRVLKWTYAY GYYLDDKVKS DFFEYLQGLL FLFHVDIING
501: FIIPCGNPWN ILESNYLTGE AESGLERLHQ CAEKDLHNFL TPVKFESTET TTPTVAEFGE FRVKLAGLTS VTRNYFENLV QALEAGLEDV HATAQAAGTS
601: IAGTSSKKGG TKSKKKQHTK PSSDHTDDGW PCERCTFLNP PSVVVCSVCE KSRY

Best Arabidopsis Sequence Match ( AT1G05890.1 )
(BLAST)

001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN

Arabidopsis Description

ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.