Factsheet for Zm00001d003207_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11042	Sorghum	nucleus	97.79	97.79
Zm00001d025750_P011	Maize	extracellular	97.45	97.45
Os04t0492100-01	Rice	nucleus	75.04	93.64
TraesCS2B01G368000.2	Wheat	nucleus	91.85	91.85
TraesCS2D01G348000.2	Wheat	nucleus	91.68	91.68
TraesCS2A01G349600.1	Wheat	nucleus	91.68	91.68
TraesCS6B01G245900.2	Wheat	nucleus	85.57	85.86
TraesCS6A01G216900.1	Wheat	nucleus	85.06	85.06
TraesCS6D01G198600.5	Wheat	nucleus	85.06	85.06
HORVU6Hr1G055260.4	Barley	nucleus	85.06	85.06
GSMUA_Achr8P28870_001	Banana	nucleus	79.46	79.73
GSMUA_Achr6P28580_001	Banana	nucleus	75.55	79.46
GSMUA_Achr9P07970_001	Banana	nucleus	73.68	78.62
GSMUA_Achr3P16920_001	Banana	nucleus	75.72	75.98
VIT_05s0102g00160.t01	Wine grape	nucleus	75.21	75.47
HORVU2Hr1G085060.3	Barley	cytosol	83.87	73.84
Bra021726.1-P	Field mustard	nucleus	62.48	73.31
KRH23186	Soybean	nucleus	72.67	72.67
KRH29654	Soybean	nucleus	72.16	72.53
KRH10154	Soybean	nucleus	72.33	72.33
Solyc06g073340.2.1	Tomato	nucleus	67.23	72.0
AT2G31510.1	Thale cress	nucleus	68.59	71.89
KRH24651	Soybean	nucleus	71.48	71.84
Bra022845.1-P	Field mustard	nucleus	67.4	71.79
CDX84781	Canola	nucleus	67.4	71.66
CDY15392	Canola	nucleus	67.74	71.63
CDY19083	Canola	nucleus	67.4	71.53
PGSC0003DMT400069483	Potato	nucleus	67.4	71.53
CDY23938	Canola	nucleus	66.89	70.74
CDY47704	Canola	nucleus	65.53	69.18
Bra015463.1-P	Field mustard	nucleus	65.36	69.0
CDY10162	Canola	nucleus	64.52	68.47
CDX86547	Canola	nucleus	63.84	67.87
CDY63791	Canola	nucleus	63.5	67.63
CDY34490	Canola	cytosol	13.24	63.41
AT1G05890.2	Thale cress	cytosol, endoplasmic reticulum, nucleus	62.65	62.12
CDX79440	Canola	cytosol	18.0	61.99
Zm00001d052709_P002	Maize	plastid	49.92	59.88
Zm00001d046141_P001	Maize	cytosol	28.86	59.86
CDY68344	Canola	nucleus	50.42	59.64
CDX70415	Canola	nucleus	52.97	59.43
Bra021742.1-P	Field mustard	nucleus	50.08	59.24
Bra006112.1-P	Field mustard	nucleus	52.97	58.43
CDY68345	Canola	cytosol	43.46	58.31
CDX78438	Canola	nucleus	48.9	58.18
CDX91196	Canola	nucleus	49.41	57.17
Bra023338.1-P	Field mustard	nucleus	53.31	56.88
CDY61443	Canola	nucleus	51.44	56.11
AT2G31780.1	Thale cress	nucleus	42.11	55.98
Bra005642.1-P	Field mustard	nucleus	47.03	54.31
AT2G31760.1	Thale cress	nucleus	47.37	54.28
CDX84759	Canola	nucleus	47.88	54.13
Bra022865.1-P	Field mustard	nucleus	47.88	54.13
CDY15373	Canola	nucleus	50.08	53.93
Zm00001d031694_P003	Maize	nucleus	59.59	53.67
AT2G31770.1	Thale cress	nucleus	49.07	53.22
CDY42068	Canola	nucleus	40.58	52.3
CDY15374	Canola	nucleus	50.59	52.01
CDX79439	Canola	nucleus	28.01	50.46
CDY34512	Canola	cytosol, nucleus, plastid	23.26	46.6
Zm00001d048683_P001	Maize	nucleus	37.69	37.95
Zm00001d013716_P002	Maize	nucleus	22.58	24.91
Zm00001d028285_P003	Maize	nucleus	25.47	24.19
Zm00001d007709_P003	Maize	nucleus	39.05	22.35
Zm00001d048017_P003	Maize	nucleus	25.3	19.48

Protein Annotations

Gene3D:1.20.120.1750	EntrezGene:100383448	MapMan:19.2.2.1.5.4.1	Gene3D:3.30.40.10	UniProt:A0A1D6E7J6	InterPro:E3_UB_ligase_RBR
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0016874	GO:GO:0019538
GO:GO:0046872	InterPro:IBR_dom	InterPro:IPR001841	InterPro:IPR001876	InterPro:IPR013083	ProteinID:ONM16408.1
ProteinID:ONM16409.1	PFAM:PF01485	ScanProsite:PS01358	PFscan:PS50089	PANTHER:PTHR11685	PANTHER:PTHR11685:SF177
SMART:SM00547	SMART:SM00647	SUPFAM:SSF57850	SUPFAM:SSF90209	UniParc:UPI0002209124	EnsemblPlantsGene:Zm00001d003207
EnsemblPlants:Zm00001d003207_P001	EnsemblPlants:Zm00001d003207_T001	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf
SEG:seg	:	:	:	:	:

Description

Probable E3 ubiquitin-protein ligase ARI8

Coordinates

chr2:-:35907483..35926218

Molecular Weight (calculated)

66453.7 Da

IEP (calculated)

5.125

GRAVY (calculated)

-0.764

Length

589 amino acids

Sequence
(BLAST)

001: MESEDDMHDA NDSAEDDFYS GGEAGLAASD DGDADYDFAD HDSDDSAELI SHRQQQNYSI LSEVDIQRRQ EDDINRVSTV LSISKPEACV LLRNYNWSVS
101: KVHDEWFADE ERVRKVVGLP EKHNEMPNDR EVTCGICFES CPRGSMSAAA CGHPFCSTCW RGYISTAISD GPGCLMLRCP DPSCAAAVGQ DMINSLAADD
201: DKEKYGRYLR RSYIEDNRKT KWCPAPGCEY AVEFVMGSGS YDVNCNCSYG FCWNCTEEAH RPVDCATVSK WILKNSAESE NMNWILANSK PCPKCKRPIE
301: KNQGCMHITC TPPCKFEFCW LCLGPWSEHG ERTGGFYACN RYESARQEGA YDESERRREM AKNSLERYTH YYERWAANQS SRQKALGDLQ SLQNDKLERL
401: SDIQSQPESQ LKFIVEAWLQ IVECRRVLKW TYAYGFYLPE HEHAKRQFFE YLQGEAESGL ERLHQCAEKE LQIYLDAESP SKDFNDFRTK LAGLTSVTRN
501: YFENLVRALE TGLNDVGPST SHGTCSKSAT SKSLGGKSKS GKNRASSSSS KSGGSTRGVD DSNIWTCDQC TYANPKSARA CQACDRQHR

Best Arabidopsis Sequence Match ( AT1G65430.1 )
(BLAST)

001: MEADDDFYSG TENYSDYADS DEDDADGEYE FVDDAADDSD DLIFRRRQQN YSVLSEADIC KLQEDDISRI STVLSISRNS SAILLRHYNW CVSRVHDEWF
101: ADEEKVRDAV GLLEKPVVDF PTDGELDCGI CFETFLSDKL HAAACGHPFC DSCWEGYITT AINDGPGCLT LRCPDPSCRA AVGQDMINLL APDKDKQKYT
201: SYFVRSYVED NRKTKWCPAP GCDYAVNFVV GSGNYDVNCR CCYSFCWNCA EEAHRPVDCD TVSKWVLKNS AESENMNWIL ANSKPCPKCK RPIEKNQGCM
301: HITCTPPCKF EFCWLCLGAW TEHGEKTGGF YACNRYEAAK QDGIYDETEK RREMAKNSLE RYTHYYERWA TNQSSRQKAL LDLKKMQTDD IEKLSDIQCQ
401: PESQLKFIIE AWLQIVECRR VLKWTYAYGF YIPDQEHGKR VFFEYLQGEA ESGLERLHQC AEKELLPYLD AKGPSEDFNE FRTKLAGLTS VTKNYFENLV
501: RALENGLSDV NSHDAYDRTS SSKSLGGKTK GSSSKASSSD SSHWPCEYCT YVNPRSTTIC QMCEHGR

Arabidopsis Description

ARI8ATARI8 [Source:UniProtKB/TrEMBL;Acc:A0A178WLP2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.