Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78438 | Canola | nucleus | 88.57 | 93.94 |
| CDX91196 | Canola | nucleus | 61.71 | 63.65 |
| CDY10162 | Canola | nucleus | 67.24 | 63.6 |
| CDY63791 | Canola | nucleus | 66.86 | 63.47 |
| CDY47704 | Canola | nucleus | 67.24 | 63.26 |
| CDX86547 | Canola | nucleus | 66.67 | 63.18 |
| CDY61443 | Canola | nucleus | 64.57 | 62.78 |
| CDX84781 | Canola | nucleus | 64.19 | 60.83 |
| CDY19083 | Canola | nucleus | 63.62 | 60.18 |
| CDY15392 | Canola | nucleus | 63.81 | 60.14 |
| CDY23938 | Canola | nucleus | 63.62 | 59.96 |
| CDY68344 | Canola | nucleus | 55.62 | 58.63 |
| Solyc06g073340.2.1 | Tomato | nucleus | 60.95 | 58.18 |
| PGSC0003DMT400069483 | Potato | nucleus | 60.57 | 57.3 |
| CDY68345 | Canola | cytosol | 46.29 | 55.35 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 60.95 | 54.51 |
| Os04t0492100-01 | Rice | nucleus | 48.57 | 54.03 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 56.76 | 53.99 |
| CDX79440 | Canola | cytosol | 17.52 | 53.8 |
| CDY16406 | Canola | nucleus | 55.81 | 53.56 |
| KRH23186 | Soybean | nucleus | 59.81 | 53.31 |
| KRH10154 | Soybean | nucleus | 59.81 | 53.31 |
| EES11042 | Sorghum | nucleus | 59.43 | 52.97 |
| Zm00001d003207_P001 | Maize | nucleus | 59.43 | 52.97 |
| CDY42068 | Canola | nucleus | 46.1 | 52.95 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 59.24 | 52.8 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 56.19 | 52.68 |
| CDY57807 | Canola | nucleus | 56.57 | 52.66 |
| Zm00001d025750_P011 | Maize | extracellular | 59.05 | 52.63 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 59.05 | 52.63 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 59.05 | 52.63 |
| CDX84759 | Canola | nucleus | 52.19 | 52.59 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 58.67 | 52.47 |
| KRH29654 | Soybean | nucleus | 58.48 | 52.39 |
| KRH24651 | Soybean | nucleus | 58.48 | 52.39 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 58.67 | 52.29 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 58.67 | 52.29 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 58.48 | 52.12 |
| CDY15373 | Canola | nucleus | 54.29 | 52.1 |
| CDX79439 | Canola | nucleus | 32.38 | 51.99 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 57.9 | 51.79 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 56.95 | 50.94 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 27.81 | 49.66 |
| CDY15374 | Canola | nucleus | 53.52 | 49.04 |
| CDY34490 | Canola | cytosol | 10.67 | 45.53 |
| Zm00001d046141_P001 | Maize | cytosol | 23.81 | 44.01 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 56.0 | 43.95 |
| CDY10159 | Canola | cytosol | 35.24 | 35.04 |
| CDY47702 | Canola | cytosol | 34.48 | 34.74 |
| CDX99146 | Canola | nucleus | 26.67 | 31.39 |
| CDX99147 | Canola | nucleus | 20.57 | 30.51 |
| CDX84438 | Canola | cytosol | 20.19 | 28.8 |
| CDY00148 | Canola | nucleus | 24.0 | 26.03 |
| CDY44786 | Canola | nucleus | 23.62 | 25.73 |
| CDY40734 | Canola | nucleus | 22.86 | 25.16 |
| CDY20037 | Canola | nucleus | 24.95 | 25.0 |
| CDY03991 | Canola | nucleus | 22.86 | 24.79 |
| CDY49768 | Canola | nucleus | 22.67 | 24.79 |
| CDY41533 | Canola | nucleus | 24.38 | 24.11 |
| CDY49559 | Canola | nucleus | 26.67 | 24.05 |
| CDY31353 | Canola | nucleus | 20.19 | 23.82 |
| CDX71262 | Canola | nucleus | 26.29 | 23.75 |
| CDY39850 | Canola | nucleus | 19.81 | 23.32 |
| CDX75425 | Canola | nucleus | 26.1 | 23.18 |
| CDX69049 | Canola | nucleus | 26.1 | 22.95 |
| CDY21562 | Canola | nucleus | 24.19 | 19.13 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 24.38 | 19.08 |
| CDX84439 | Canola | nucleus | 23.81 | 19.05 |
| CDY41534 | Canola | nucleus | 6.48 | 18.38 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078C0A8 | EnsemblPlants:CDX70415 | ProteinID:CDX70415 |
| ProteinID:CDX70415.1 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00140223001 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF01485 | ScanProsite:PS00518 |
| PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 | SMART:SM00184 | SMART:SM00647 | SUPFAM:SSF57850 |
| UniPathway:UPA00143 | UniParc:UPI0004EF2434 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg |
Description
BnaC03g04990D
Coordinates
chrLK031791:-:329422..330999
Molecular Weight (calculated)
59789.0 Da
IEP (calculated)
4.799
GRAVY (calculated)
-0.564
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSDDYYMES GEEDLYSDGA DDYNDGADHD DDKDDTGFLG DDDDDSSMIS SPRSDINYVV LKEEDIRRKQ ESDIAQVSMI LSVSKVEASV LLLHYHWNVG
101: KVNDEWFADE RRVRTSAGLE GGSVIVPYSK GGKVACGICF DYFFPIDIVL ILCGHAFCST CWTSYISIAI NDGPGCLMQK CPEPSCPVAV GPDMVEKLAS
201: FEAKDKYDRY FLRSYVEENK KTKWCPAPGC EHAIEFSATG TGSSYDVSCL CSHSFCWNCT EDAHRPVDCD RVSQWIRKNS VEAENTKWIL DNSKPCPKCK
301: RPIEKNHGCM HMSCTPPCRH QFCWLCLGAW SEHGEGTGGP YTCNRYSKAK GQGLHDEAEM KREMAKHSLE KYTHYYERWA GNQMSRQKAI GDLQKFLSVD
401: VMKLSDKQCI PETELGFITD AWLQIIECRR VLKWTYAYGY YLLESEQEKR QFFEYMQGEA ESGLERLHKC VELESEVFQY PEDAPKQDFK GFRTKLTTLT
501: SVTKSHFETL VKALENDLAD VGFAR
101: KVNDEWFADE RRVRTSAGLE GGSVIVPYSK GGKVACGICF DYFFPIDIVL ILCGHAFCST CWTSYISIAI NDGPGCLMQK CPEPSCPVAV GPDMVEKLAS
201: FEAKDKYDRY FLRSYVEENK KTKWCPAPGC EHAIEFSATG TGSSYDVSCL CSHSFCWNCT EDAHRPVDCD RVSQWIRKNS VEAENTKWIL DNSKPCPKCK
301: RPIEKNHGCM HMSCTPPCRH QFCWLCLGAW SEHGEGTGGP YTCNRYSKAK GQGLHDEAEM KREMAKHSLE KYTHYYERWA GNQMSRQKAI GDLQKFLSVD
401: VMKLSDKQCI PETELGFITD AWLQIIECRR VLKWTYAYGY YLLESEQEKR QFFEYMQGEA ESGLERLHKC VELESEVFQY PEDAPKQDFK GFRTKLTTLT
501: SVTKSHFETL VKALENDLAD VGFAR
001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN
Arabidopsis Description
ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.