Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015460.1-P | Field mustard | nucleus | 98.08 | 98.27 |
| CDY10159 | Canola | cytosol | 93.47 | 92.23 |
| AT1G05880.2 | Thale cress | cytosol | 45.3 | 47.58 |
| CDY68345 | Canola | cytosol | 32.25 | 38.27 |
| CDX79440 | Canola | cytosol | 12.48 | 38.01 |
| CDY19083 | Canola | nucleus | 39.54 | 37.12 |
| CDY15392 | Canola | nucleus | 39.54 | 36.98 |
| CDY68344 | Canola | nucleus | 35.32 | 36.95 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 36.28 | 36.91 |
| CDY47704 | Canola | nucleus | 38.77 | 36.2 |
| CDX84781 | Canola | nucleus | 38.39 | 36.1 |
| CDX86547 | Canola | nucleus | 38.39 | 36.1 |
| CDY23938 | Canola | nucleus | 38.58 | 36.09 |
| CDY10162 | Canola | nucleus | 38.39 | 36.04 |
| CDY63791 | Canola | nucleus | 38.0 | 35.8 |
| CDX84759 | Canola | nucleus | 35.12 | 35.12 |
| CDY42068 | Canola | nucleus | 30.71 | 35.01 |
| CDX70415 | Canola | nucleus | 34.74 | 34.48 |
| CDY57807 | Canola | nucleus | 36.85 | 34.04 |
| CDY16406 | Canola | nucleus | 35.51 | 33.82 |
| CDX78438 | Canola | nucleus | 31.86 | 33.54 |
| CDX79439 | Canola | nucleus | 20.92 | 33.33 |
| CDX91196 | Canola | nucleus | 32.44 | 33.2 |
| CDY15373 | Canola | nucleus | 34.74 | 33.09 |
| CDY15374 | Canola | nucleus | 36.08 | 32.81 |
| CDY61443 | Canola | nucleus | 33.97 | 32.78 |
| KRH24184 | Soybean | nucleus | 30.33 | 30.27 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 16.89 | 29.93 |
| CDY34490 | Canola | cytosol | 6.53 | 27.64 |
| CDX99146 | Canola | nucleus | 22.46 | 26.23 |
| CDX99147 | Canola | nucleus | 17.08 | 25.14 |
| CDX84438 | Canola | cytosol | 16.7 | 23.64 |
| CDY41533 | Canola | nucleus | 22.65 | 22.22 |
| CDY40734 | Canola | nucleus | 19.0 | 20.75 |
| CDY44786 | Canola | nucleus | 18.81 | 20.33 |
| CDY49768 | Canola | nucleus | 18.04 | 19.58 |
| CDY03991 | Canola | nucleus | 18.04 | 19.42 |
| CDY00148 | Canola | nucleus | 18.04 | 19.42 |
| CDY41534 | Canola | nucleus | 6.72 | 18.92 |
| CDY49559 | Canola | nucleus | 21.11 | 18.9 |
| CDY20037 | Canola | nucleus | 19.0 | 18.89 |
| CDY31353 | Canola | nucleus | 16.12 | 18.88 |
| CDY39850 | Canola | nucleus | 15.93 | 18.61 |
| CDX75425 | Canola | nucleus | 20.73 | 18.27 |
| CDX71262 | Canola | nucleus | 20.35 | 18.24 |
| CDX69049 | Canola | nucleus | 20.73 | 18.09 |
| CDX84439 | Canola | nucleus | 22.07 | 17.53 |
| CDY21562 | Canola | nucleus | 22.07 | 17.32 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 21.69 | 16.84 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078IC51 | UniProt:A0A078IC51 | EnsemblPlants:CDY47702 |
| ProteinID:CDY47702 | ProteinID:CDY47702.1 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00087965001 | InterPro:IBR_dom | InterPro:IPR001841 |
| InterPro:IPR013083 | PFAM:PF01485 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF211 | SMART:SM00647 |
| SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EE4D0A | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaA10g03910DBnaA10g03910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IC51]
Coordinates
chrLK032731:+:19900..22854
Molecular Weight (calculated)
60458.8 Da
IEP (calculated)
5.156
GRAVY (calculated)
-0.655
Length
521 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDSDIKRLG EILITAEEEE EWLNTPDEHD HTETSTHQSY VTILKEGDIR SRMKEEIQRV SNTYSISEDD ATLLLAHFRW DDIELHKKWS DNAKSVRESV
101: GIFELERPLD LPSDDKNFCC GICFKLLSLE RSASVSCGHR VCKFCWRSHI NKSINKIADV DWYGTLKCPY DICRASVGGD MIEKFACEEE KTKYYRYLFR
201: SYVEGSKVIK CCPAKGRSCD VHLTPGSGNF DVLCLCLLSF CWNCSKDVHS PMDCESAAKW LRMNSSDYQD PNWVRQNTVP CPRCNLRIRE NQDCSLKMRC
301: FPPCNYDFCW RCRGQWTEHG LDLYTCTHDE VSYEEYCFGN MAEYAAGRYK DCHEKWMSNE STVMKTKAKL QQLHTDVIPD LSNKQLATVH QLEFVAEAWS
401: QIMECRRVLK WTYAYEYYLG EDQVEKQAFL KLKQDNAEIP LEKLHYHAEN QLNMLLDSDG PSENFNKFRS DLTDSTRITR NHYELLLRDL EDGLSNVVGA
501: STSQRAHNED DASGSSSIHD D
101: GIFELERPLD LPSDDKNFCC GICFKLLSLE RSASVSCGHR VCKFCWRSHI NKSINKIADV DWYGTLKCPY DICRASVGGD MIEKFACEEE KTKYYRYLFR
201: SYVEGSKVIK CCPAKGRSCD VHLTPGSGNF DVLCLCLLSF CWNCSKDVHS PMDCESAAKW LRMNSSDYQD PNWVRQNTVP CPRCNLRIRE NQDCSLKMRC
301: FPPCNYDFCW RCRGQWTEHG LDLYTCTHDE VSYEEYCFGN MAEYAAGRYK DCHEKWMSNE STVMKTKAKL QQLHTDVIPD LSNKQLATVH QLEFVAEAWS
401: QIMECRRVLK WTYAYEYYLG EDQVEKQAFL KLKQDNAEIP LEKLHYHAEN QLNMLLDSDG PSENFNKFRS DLTDSTRITR NHYELLLRDL EDGLSNVVGA
501: STSQRAHNED DASGSSSIHD D
001: MDNNSVIGSE VDAEADESYV NAALEDGQTG KKSVQRNYAT VLTEEDIRAL MEIDVQSVSD FTSLSKAEAT LLLSHLRWNV DCICKQWSAG AQSVRDSVGL
101: LELDPPSDDN EYFCGACGES HPHKNLASVS CGHRICTRCW TSHINKIISE KPAAEWNLWL KCPVRVGLHA SCPASVGLDT IERFASKREK FNYNQYLLRS
201: YVDNRETMKW HPIQGSRCAI DLSPGSGNAS VSCHRLVRFC WNCREDAHSP VDCKTAAKWL LENAVPCPKC KLRIPRNQDN SLKMKCLPCN YVFCWFCHVD
301: WIEDMEGTGG DLHFCTFDAV LSDQRGKMSE SDSNRYEDCY ENWDSNELLM QKEQANLPKL DTIIQELSNT QLENVSQLKF ILEAGLQIIE CRRVLEWTYV
401: YGYYLREDEV GKQNLLKDTQ ERLKKFVENL KHCLETNLQP FRYEEEPSKD FNAFRIKLTE LTSLTRNHYE NVVKDVENGL ASVVSEGEAS GSGRNQ
101: LELDPPSDDN EYFCGACGES HPHKNLASVS CGHRICTRCW TSHINKIISE KPAAEWNLWL KCPVRVGLHA SCPASVGLDT IERFASKREK FNYNQYLLRS
201: YVDNRETMKW HPIQGSRCAI DLSPGSGNAS VSCHRLVRFC WNCREDAHSP VDCKTAAKWL LENAVPCPKC KLRIPRNQDN SLKMKCLPCN YVFCWFCHVD
301: WIEDMEGTGG DLHFCTFDAV LSDQRGKMSE SDSNRYEDCY ENWDSNELLM QKEQANLPKL DTIIQELSNT QLENVSQLKF ILEAGLQIIE CRRVLEWTYV
401: YGYYLREDEV GKQNLLKDTQ ERLKKFVENL KHCLETNLQP FRYEEEPSKD FNAFRIKLTE LTSLTRNHYE NVVKDVENGL ASVVSEGEAS GSGRNQ
Arabidopsis Description
ARI12Probable E3 ubiquitin-protein ligase ARI12 [Source:UniProtKB/Swiss-Prot;Acc:Q84RQ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.