Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- endoplasmic reticulum 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68345 | Canola | cytosol | 73.47 | 95.9 |
| CDY68344 | Canola | nucleus | 65.97 | 75.9 |
| CDX79440 | Canola | cytosol | 21.99 | 73.68 |
| CDX84759 | Canola | nucleus | 66.49 | 73.13 |
| CDX79439 | Canola | nucleus | 40.49 | 70.95 |
| CDY42068 | Canola | nucleus | 54.97 | 68.93 |
| CDY15373 | Canola | nucleus | 64.75 | 67.82 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 33.86 | 65.99 |
| AT2G31780.1 | Thale cress | nucleus | 50.09 | 64.79 |
| AT2G31760.1 | Thale cress | nucleus | 57.42 | 64.01 |
| AT2G31770.1 | Thale cress | nucleus | 57.94 | 61.14 |
| CDX84781 | Canola | nucleus | 54.45 | 56.32 |
| CDY19083 | Canola | nucleus | 54.28 | 56.04 |
| CDY15392 | Canola | nucleus | 54.28 | 55.83 |
| CDY63791 | Canola | nucleus | 53.4 | 55.33 |
| CDY23938 | Canola | nucleus | 53.75 | 55.3 |
| CDX86547 | Canola | nucleus | 53.4 | 55.23 |
| CDY10162 | Canola | nucleus | 53.4 | 55.14 |
| CDY47704 | Canola | nucleus | 53.58 | 55.02 |
| CDX70415 | Canola | nucleus | 49.04 | 53.52 |
| CDX91196 | Canola | nucleus | 47.12 | 53.05 |
| CDY61443 | Canola | nucleus | 49.74 | 52.78 |
| Solyc06g073340.2.1 | Tomato | nucleus | 50.44 | 52.55 |
| PGSC0003DMT400069483 | Potato | nucleus | 50.79 | 52.43 |
| CDX78438 | Canola | nucleus | 45.03 | 52.12 |
| Os04t0492100-01 | Rice | nucleus | 42.76 | 51.91 |
| CDY16406 | Canola | nucleus | 49.39 | 51.74 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 49.74 | 51.63 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 49.91 | 51.07 |
| CDY57807 | Canola | nucleus | 50.09 | 50.89 |
| EES11042 | Sorghum | nucleus | 52.18 | 50.76 |
| KRH23186 | Soybean | nucleus | 52.18 | 50.76 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 51.83 | 50.6 |
| Zm00001d003207_P001 | Maize | nucleus | 52.01 | 50.59 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 51.83 | 50.42 |
| KRH24651 | Soybean | nucleus | 51.48 | 50.34 |
| KRH29654 | Soybean | nucleus | 51.48 | 50.34 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 51.48 | 50.26 |
| KRH10154 | Soybean | nucleus | 51.66 | 50.25 |
| Zm00001d025750_P011 | Maize | extracellular | 51.66 | 50.25 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 51.66 | 50.25 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 51.66 | 50.25 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 50.96 | 49.74 |
| CDY34490 | Canola | cytosol | 10.65 | 49.59 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 50.96 | 49.58 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 50.61 | 49.4 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 50.61 | 49.24 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 50.44 | 49.07 |
| Zm00001d046141_P001 | Maize | cytosol | 20.77 | 41.9 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 48.52 | 41.55 |
| CDY10159 | Canola | cytosol | 33.51 | 36.36 |
| CDY47702 | Canola | cytosol | 32.81 | 36.08 |
| CDX99146 | Canola | nucleus | 22.16 | 28.48 |
| CDX84438 | Canola | cytosol | 17.28 | 26.9 |
| CDX99147 | Canola | nucleus | 16.58 | 26.84 |
| CDY44786 | Canola | nucleus | 21.29 | 25.31 |
| CDY40734 | Canola | nucleus | 20.77 | 24.95 |
| CDY00148 | Canola | nucleus | 20.94 | 24.79 |
| CDY20037 | Canola | nucleus | 22.16 | 24.24 |
| CDX75425 | Canola | nucleus | 24.61 | 23.86 |
| CDY39850 | Canola | nucleus | 18.5 | 23.77 |
| CDY41533 | Canola | nucleus | 21.99 | 23.73 |
| CDX69049 | Canola | nucleus | 24.61 | 23.62 |
| CDY49768 | Canola | nucleus | 19.72 | 23.54 |
| CDY03991 | Canola | nucleus | 19.55 | 23.14 |
| CDY49559 | Canola | nucleus | 23.39 | 23.02 |
| CDY31353 | Canola | nucleus | 17.8 | 22.92 |
| CDX71262 | Canola | nucleus | 23.04 | 22.72 |
| CDY21562 | Canola | nucleus | 24.08 | 20.78 |
| CDY41534 | Canola | nucleus | 6.63 | 20.54 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 23.04 | 19.67 |
| CDX84439 | Canola | nucleus | 21.99 | 19.21 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078FR60 | UniProt:A0A078FR60 | EnsemblPlants:CDY15374 |
| ProteinID:CDY15374 | ProteinID:CDY15374.1 | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00085673001 | InterPro:IBR_dom | InterPro:IPR001841 |
| InterPro:IPR013083 | PFAM:PF01485 | ScanProsite:PS00518 | PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF211 |
| SMART:SM00647 | SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EE26D8 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| InterPro:Znf_RING_CS | SEG:seg | : | : | : | : |
Description
BnaC04g42490DBnaC04g42490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FR60]
Coordinates
chrLK032054:-:410816..413053
Molecular Weight (calculated)
66509.5 Da
IEP (calculated)
5.271
GRAVY (calculated)
-0.514
Length
573 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYSDDDGML DNESGDDNLY SDDAADSNPG FAEEDMDKDS TFQLSYVVLN EEDIRKHQRN DIEQVSTVLS ISQVEAIVLL LHYQWGASRI EDEWFTDEEK
101: VRESVGLLKE PVVDLNDKVN IECGICFDSF LQKDIATVSC GHPYCKTCWT GYITSKINDG PGCLTVQCPE PSCSAVVGQD MINSVVTKEE DKEKYYRYFL
201: RSYIESSQKK IKWCPSPGCE YAVDFGGESE NYDVSCLCSY EFCWNCCEDA HRPVDCHTVA KWIFKNNDES ENTTWILANT KLCPSCKRQI EKNQGCNHMR
301: CSICKHRFCW ACLDPLNNHK SCHNFRGETE VKREMAKKAI DRYMHYYERW VGNQSSRVMA MADLKKLQSV QLVKLSVKHG IPETQLQFTV EAWLQIIECR
401: RVLKWTYAYG YYLPEQESTK KRFFEYLQGE AEVGLERLHH CAELEFQELV KETEDFSKKF EDFRRKLIGL TKVTKTYFEN LVKALENGLA DVEPNETKSA
501: TDSNKRQKLN SKFGFLALSD GFDSFSRVLF GYWSLMKALF QSLRYLFQVS PLLLSLRRHF EASQVRLLRF GLW
101: VRESVGLLKE PVVDLNDKVN IECGICFDSF LQKDIATVSC GHPYCKTCWT GYITSKINDG PGCLTVQCPE PSCSAVVGQD MINSVVTKEE DKEKYYRYFL
201: RSYIESSQKK IKWCPSPGCE YAVDFGGESE NYDVSCLCSY EFCWNCCEDA HRPVDCHTVA KWIFKNNDES ENTTWILANT KLCPSCKRQI EKNQGCNHMR
301: CSICKHRFCW ACLDPLNNHK SCHNFRGETE VKREMAKKAI DRYMHYYERW VGNQSSRVMA MADLKKLQSV QLVKLSVKHG IPETQLQFTV EAWLQIIECR
401: RVLKWTYAYG YYLPEQESTK KRFFEYLQGE AEVGLERLHH CAELEFQELV KETEDFSKKF EDFRRKLIGL TKVTKTYFEN LVKALENGLA DVEPNETKSA
501: TDSNKRQKLN SKFGFLALSD GFDSFSRVLF GYWSLMKALF QSLRYLFQVS PLLLSLRRHF EASQVRLLRF GLW
001: MDYSDDDMID NESGEENNSD GGGNESYNYN AAVDTIILSE KSYVIIKEEE ILKLQRDDIE RVSTILFLSQ VEAIVLLLHY HWCVSKLEDE WFTDEERIRK
101: TVGILKEPVV DVNGTEVDIQ CGICFESYTR KEIASVSCGH PYCKTCWTGY ITTKIEDGPG CLRVKCPEPS CYAVVGQDMI DEVTEKKDKD KYYRYFLRSY
201: VEDGKKMKWC PSPGCECAVE FGESSGYDVA CLCSYRFCWN CSEDAHSPVD CETVSKWIFK NQDESENKNW ILANSKPCPK CKRPIEKSHG CNHMTCSASC
301: GHRFCWICGK SYSDHYACNN YVEDADHDKR TLLQSEIKRY THYYVRWVEN QSSRLKAMSD LEKFQSVQLK QLSDNQCKPK IDLQFIVDAW LQIIECRRVL
401: KWTYAYGYYL DNLAKRPLFE YLQGEAETGL ERLHHCAENE LKQFFIKSED PSDTFNAFRM KLTGLTKVTK TYFDNLVKAL ENGLADVTKS SEESADFLET
501: QKLYDAYISE GCFF
101: TVGILKEPVV DVNGTEVDIQ CGICFESYTR KEIASVSCGH PYCKTCWTGY ITTKIEDGPG CLRVKCPEPS CYAVVGQDMI DEVTEKKDKD KYYRYFLRSY
201: VEDGKKMKWC PSPGCECAVE FGESSGYDVA CLCSYRFCWN CSEDAHSPVD CETVSKWIFK NQDESENKNW ILANSKPCPK CKRPIEKSHG CNHMTCSASC
301: GHRFCWICGK SYSDHYACNN YVEDADHDKR TLLQSEIKRY THYYVRWVEN QSSRLKAMSD LEKFQSVQLK QLSDNQCKPK IDLQFIVDAW LQIIECRRVL
401: KWTYAYGYYL DNLAKRPLFE YLQGEAETGL ERLHHCAENE LKQFFIKSED PSDTFNAFRM KLTGLTKVTK TYFDNLVKAL ENGLADVTKS SEESADFLET
501: QKLYDAYISE GCFF
Arabidopsis Description
ARI10Probable E3 ubiquitin-protein ligase ARI10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.