Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63791 | Canola | nucleus | 96.75 | 96.93 |
| CDY10162 | Canola | nucleus | 88.45 | 88.29 |
| CDY47704 | Canola | nucleus | 88.45 | 87.81 |
| CDY15392 | Canola | nucleus | 77.98 | 77.56 |
| CDX84781 | Canola | nucleus | 77.44 | 77.44 |
| CDY19083 | Canola | nucleus | 77.44 | 77.3 |
| CDY23938 | Canola | nucleus | 76.9 | 76.48 |
| AT1G05890.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 81.59 | 76.09 |
| Solyc06g073340.2.1 | Tomato | nucleus | 66.43 | 66.91 |
| PGSC0003DMT400069483 | Potato | nucleus | 66.97 | 66.85 |
| CDX70415 | Canola | nucleus | 63.18 | 66.67 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 70.4 | 66.44 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 66.43 | 65.71 |
| KRH10154 | Soybean | nucleus | 69.68 | 65.53 |
| KRH23186 | Soybean | nucleus | 69.68 | 65.53 |
| Os04t0492100-01 | Rice | nucleus | 55.78 | 65.47 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 64.8 | 65.04 |
| CDY68344 | Canola | nucleus | 58.3 | 64.86 |
| CDY16406 | Canola | nucleus | 63.9 | 64.72 |
| CDX78438 | Canola | nucleus | 57.76 | 64.65 |
| CDY57807 | Canola | nucleus | 65.52 | 64.36 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 68.05 | 64.22 |
| KRH24651 | Soybean | nucleus | 67.87 | 64.16 |
| EES11042 | Sorghum | nucleus | 68.05 | 64.01 |
| Zm00001d003207_P001 | Maize | nucleus | 67.87 | 63.84 |
| CDX79440 | Canola | cytosol | 19.68 | 63.74 |
| Zm00001d025750_P011 | Maize | extracellular | 67.69 | 63.67 |
| KRH29654 | Soybean | nucleus | 67.33 | 63.65 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 67.33 | 63.54 |
| CDY34490 | Canola | cytosol | 14.08 | 63.41 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 67.33 | 63.33 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 67.33 | 63.33 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 67.33 | 63.33 |
| CDX91196 | Canola | nucleus | 58.12 | 63.26 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 66.97 | 63.2 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 67.15 | 63.16 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 67.15 | 63.16 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 66.97 | 62.99 |
| CDY61443 | Canola | nucleus | 60.29 | 61.85 |
| CDY68345 | Canola | cytosol | 47.11 | 59.45 |
| CDX84759 | Canola | nucleus | 55.05 | 58.54 |
| CDY15373 | Canola | nucleus | 57.4 | 58.14 |
| CDY42068 | Canola | nucleus | 47.83 | 57.99 |
| CDX79439 | Canola | nucleus | 33.39 | 56.57 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 28.52 | 53.74 |
| CDY15374 | Canola | nucleus | 55.23 | 53.4 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 62.64 | 51.87 |
| Zm00001d046141_P001 | Maize | cytosol | 24.73 | 48.24 |
| CDY47702 | Canola | cytosol | 36.1 | 38.39 |
| CDY10159 | Canola | cytosol | 36.46 | 38.26 |
| CDX99146 | Canola | nucleus | 25.09 | 31.17 |
| CDX99147 | Canola | nucleus | 18.41 | 28.81 |
| CDY00148 | Canola | nucleus | 24.55 | 28.1 |
| CDX84438 | Canola | cytosol | 18.41 | 27.72 |
| CDY44786 | Canola | nucleus | 23.29 | 26.76 |
| CDY20037 | Canola | nucleus | 25.27 | 26.72 |
| CDY40734 | Canola | nucleus | 22.74 | 26.42 |
| CDY49768 | Canola | nucleus | 22.56 | 26.04 |
| CDY49559 | Canola | nucleus | 27.26 | 25.95 |
| CDY03991 | Canola | nucleus | 22.2 | 25.41 |
| CDX75425 | Canola | nucleus | 27.08 | 25.38 |
| CDX69049 | Canola | nucleus | 26.9 | 24.96 |
| CDX71262 | Canola | nucleus | 26.17 | 24.96 |
| CDY41533 | Canola | nucleus | 22.74 | 23.73 |
| CDY39850 | Canola | nucleus | 18.95 | 23.54 |
| CDY31353 | Canola | nucleus | 18.59 | 23.15 |
| CDY41534 | Canola | nucleus | 6.86 | 20.54 |
| CDX69926 | Canola | cytosol, mitochondrion, nucleus | 24.37 | 20.12 |
| CDY21562 | Canola | nucleus | 23.83 | 19.88 |
| CDX84439 | Canola | nucleus | 23.29 | 19.66 |
Protein Annotations
| Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.1 | Gene3D:3.30.40.10 | GO:A0A078DC11 | EnsemblPlants:CDX86547 | ProteinID:CDX86547 |
| ProteinID:CDX86547.1 | ncoils:Coil | InterPro:E3_UB_ligase_RBR | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00145164001 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF01485 |
| PFscan:PS50089 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 | SMART:SM00647 | SUPFAM:SSF57850 | UniPathway:UPA00143 |
| UniParc:UPI0004EEADA2 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
BnaC08g01560D
Coordinates
chrLK031846:-:525480..529571
Molecular Weight (calculated)
62767.9 Da
IEP (calculated)
4.786
GRAVY (calculated)
-0.717
Length
554 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSEDDLLNA HDMESGEEED DFYSGETDDY NDSEGGEPDY GFVEEDVDDS VMIASHRSQV NYVVLKEEDI RRHQKDDIGQ VSMVLSISEV EASILLLHYH
101: WSVSKVHDEW FADEERVRKT VGILDGPDDS GELTCGICFE TFPPEEILSV ACGHPFCSTC WTGYISTTIN GGPGCLMLKC PEPSCPAAVG QDMFEKLASK
201: EDKEKYYRYF IRSYVEDNRK MKWCPAPGCE HAIDFAAGTG SYDVSCLCSH SFCWNCTEEA HRPVDCETVA QWIRKNSAES ENMNWILANS KPCPKCKRPI
301: EKNHGCMHMT CTPPCKYEFC WLCLNAWTDH GERTGGFYAC NKYEAGKQEG RYDEAEKRRE MAKNSLERYT HYYERWASNQ TSRQKAMVDL EKARSEKLEK
401: LSDIHGTPES QLKCITEAWL QIIECRRVLK WTYAYGYYLP DHDKKQFFEY LQGEAESGLE RLHKCVEKEL EVFLVAEGPS DDFNHFRTKL TGLTSITKTY
501: FENLVKALEN GLADVDTQGA SSKSTNTKSS KTNGGGKGKG SSKSGGSSKN LDGN
101: WSVSKVHDEW FADEERVRKT VGILDGPDDS GELTCGICFE TFPPEEILSV ACGHPFCSTC WTGYISTTIN GGPGCLMLKC PEPSCPAAVG QDMFEKLASK
201: EDKEKYYRYF IRSYVEDNRK MKWCPAPGCE HAIDFAAGTG SYDVSCLCSH SFCWNCTEEA HRPVDCETVA QWIRKNSAES ENMNWILANS KPCPKCKRPI
301: EKNHGCMHMT CTPPCKYEFC WLCLNAWTDH GERTGGFYAC NKYEAGKQEG RYDEAEKRRE MAKNSLERYT HYYERWASNQ TSRQKAMVDL EKARSEKLEK
401: LSDIHGTPES QLKCITEAWL QIIECRRVLK WTYAYGYYLP DHDKKQFFEY LQGEAESGLE RLHKCVEKEL EVFLVAEGPS DDFNHFRTKL TGLTSITKTY
501: FENLVKALEN GLADVDTQGA SSKSTNTKSS KTNGGGKGKG SSKSGGSSKN LDGN
001: MDSEEDMLDA HDMESGEDDF YSGGTDDCND SDDGEPDYGF VEEDADDSAM IASHRSQKNF CVLREEDIRR HQMDNIERVS VVLSITEVEA SILLRHFHWS
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
Arabidopsis Description
ARI7Probable E3 ubiquitin-protein ligase ARI7 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.