Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23186 | Soybean | nucleus | 98.47 | 98.47 |
| KRH29654 | Soybean | nucleus | 87.61 | 88.05 |
| KRH24651 | Soybean | nucleus | 87.1 | 87.54 |
| VIT_05s0102g00160.t01 | Wine grape | nucleus | 79.46 | 79.73 |
| Bra021726.1-P | Field mustard | nucleus | 66.38 | 77.89 |
| Os04t0492100-01 | Rice | nucleus | 61.29 | 76.48 |
| Solyc06g073340.2.1 | Tomato | nucleus | 70.63 | 75.64 |
| Bra022845.1-P | Field mustard | nucleus | 70.46 | 75.05 |
| CDY19083 | Canola | nucleus | 70.63 | 74.95 |
| PGSC0003DMT400069483 | Potato | nucleus | 70.63 | 74.95 |
| AT2G31510.1 | Thale cress | nucleus | 71.48 | 74.91 |
| CDX84781 | Canola | nucleus | 70.46 | 74.91 |
| GSMUA_Achr6P28580_001 | Banana | nucleus | 71.14 | 74.82 |
| CDY15392 | Canola | nucleus | 70.63 | 74.69 |
| GSMUA_Achr9P07970_001 | Banana | nucleus | 69.95 | 74.64 |
| GSMUA_Achr8P28870_001 | Banana | nucleus | 74.19 | 74.45 |
| CDY23938 | Canola | nucleus | 69.61 | 73.61 |
| TraesCS2A01G349600.1 | Wheat | nucleus | 73.01 | 73.01 |
| TraesCS2D01G348000.2 | Wheat | nucleus | 73.01 | 73.01 |
| TraesCS2B01G368000.2 | Wheat | nucleus | 73.01 | 73.01 |
| EES11042 | Sorghum | nucleus | 72.84 | 72.84 |
| GSMUA_Achr3P16920_001 | Banana | nucleus | 72.16 | 72.4 |
| Zm00001d025750_P011 | Maize | extracellular | 72.33 | 72.33 |
| Zm00001d003207_P001 | Maize | nucleus | 72.33 | 72.33 |
| TraesCS6B01G245900.2 | Wheat | nucleus | 71.65 | 71.89 |
| HORVU6Hr1G055260.4 | Barley | nucleus | 71.31 | 71.31 |
| TraesCS6D01G198600.5 | Wheat | nucleus | 71.14 | 71.14 |
| TraesCS6A01G216900.1 | Wheat | nucleus | 71.14 | 71.14 |
| CDY47704 | Canola | nucleus | 67.23 | 70.97 |
| CDY10162 | Canola | nucleus | 66.72 | 70.81 |
| Bra015463.1-P | Field mustard | nucleus | 66.89 | 70.61 |
| CDX86547 | Canola | nucleus | 65.53 | 69.68 |
| CDY63791 | Canola | nucleus | 65.2 | 69.44 |
| CDY34490 | Canola | cytosol | 14.26 | 68.29 |
| CDX79440 | Canola | cytosol | 18.85 | 64.91 |
| AT1G05890.2 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 65.2 | 64.65 |
| HORVU2Hr1G085060.3 | Barley | cytosol | 68.08 | 59.94 |
| CDX70415 | Canola | nucleus | 53.31 | 59.81 |
| CDX91196 | Canola | nucleus | 51.44 | 59.53 |
| CDY68345 | Canola | cytosol | 43.97 | 59.0 |
| Bra006112.1-P | Field mustard | nucleus | 53.31 | 58.8 |
| CDX78438 | Canola | nucleus | 49.41 | 58.79 |
| CDY68344 | Canola | nucleus | 49.58 | 58.63 |
| Bra023338.1-P | Field mustard | nucleus | 54.84 | 58.51 |
| Bra021742.1-P | Field mustard | nucleus | 49.24 | 58.23 |
| CDY61443 | Canola | nucleus | 52.97 | 57.78 |
| AT2G31760.1 | Thale cress | nucleus | 47.88 | 54.86 |
| Bra005642.1-P | Field mustard | nucleus | 47.37 | 54.71 |
| AT2G31780.1 | Thale cress | nucleus | 41.09 | 54.63 |
| CDX84759 | Canola | nucleus | 48.22 | 54.51 |
| Bra022865.1-P | Field mustard | nucleus | 48.22 | 54.51 |
| CDY15373 | Canola | nucleus | 49.75 | 53.56 |
| AT2G31770.1 | Thale cress | nucleus | 48.9 | 53.04 |
| CDY42068 | Canola | nucleus | 40.92 | 52.74 |
| CDY15374 | Canola | nucleus | 50.25 | 51.66 |
| Zm00001d046141_P001 | Maize | cytosol | 24.62 | 51.06 |
| CDX79439 | Canola | nucleus | 27.33 | 49.24 |
| CDY34512 | Canola | cytosol, nucleus, plastid | 23.94 | 47.96 |
| KRH24184 | Soybean | nucleus | 39.73 | 44.83 |
| KRH29521 | Soybean | nucleus | 25.81 | 26.21 |
| KRH24517 | Soybean | nucleus | 25.47 | 25.86 |
Protein Annotations
| Gene3D:1.20.120.1750 | EntrezGene:100793295 | MapMan:19.2.2.1.5.4.1 | Gene3D:2.20.28.140 | Gene3D:3.30.40.10 | EMBL:ACUP02009119 |
| InterPro:E3_UB_ligase_RBR | EnsemblPlantsGene:GLYMA_15G031100 | GO:GO:0000151 | GO:GO:0000209 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031624 | GO:GO:0032436 | GO:GO:0042787 |
| GO:GO:0046872 | GO:GO:0061630 | UniProt:I1MD76 | InterPro:IBR_dom | InterPro:IPR001841 | InterPro:IPR001876 |
| InterPro:IPR013083 | EMBL:JX392392 | EnsemblPlants:KRH10154 | ProteinID:KRH10154 | ProteinID:KRH10154.1 | PFAM:PF01485 |
| ScanProsite:PS01358 | PFscan:PS50089 | PFscan:PS50199 | PANTHER:PTHR11685 | PANTHER:PTHR11685:SF177 | SMART:SM00547 |
| SMART:SM00647 | SUPFAM:SSF57850 | SUPFAM:SSF90209 | UniParc:UPI0001B371E5 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| InterPro:Znf_RanBP2 | InterPro:Znf_RanBP2_sf | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr15:-:2487422..2494223
Molecular Weight (calculated)
67372.0 Da
IEP (calculated)
5.003
GRAVY (calculated)
-0.745
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSEDDMHDA NDVESLDDDF YSGETEDPPM DYYSDYDDNA DDYFDDADDS DRIESRRPEQ NFTILRELDI RQRQEDDIAR VAAVLSIPRV SASILLRHYN
101: WSVSKVHDAW FADEDQVRKT VGLLEKPVFQ NSNTRELTCG ICFEMYPRAR VESTACGHPY CYSCWAGYFS TSINDGPGCL VLRCPDPSCG AAVGQDMINL
201: LASDEDKQKY DRYLLRSYIE DNKKTKWCPA PGCEYAVTFD AGSGNYDVSC LCSYSFCWNC TEEAHRPVDC GTVSKWILKN SAESENMNWI LANSKPCPKC
301: KRPIEKNQGC MHMTCTPPCK FEFCWLCLGA WSDHGERTGG FYACNRYEAA KQEGVYDETE RRREMAKNSL ERYTHYYERW ASNQSSRQKA LADLHQMQTV
401: HIEKLSDTQC QPESQLKFIT EAWLQIVECR RVLKWTYSYG YYLPEHEHAK KQFFEYLQGE AESGLERLHQ CAEKELQLFL NADGPSKDFN DFRTKLAGLT
501: SVTRNYFENL VRALENGLVD VDSNGAASSK ATSSKNAAGS SKGRGGRGKA TIRTISSRMT DDNHWSCEHC TYANVKSATT CQMCNQQRR
101: WSVSKVHDAW FADEDQVRKT VGLLEKPVFQ NSNTRELTCG ICFEMYPRAR VESTACGHPY CYSCWAGYFS TSINDGPGCL VLRCPDPSCG AAVGQDMINL
201: LASDEDKQKY DRYLLRSYIE DNKKTKWCPA PGCEYAVTFD AGSGNYDVSC LCSYSFCWNC TEEAHRPVDC GTVSKWILKN SAESENMNWI LANSKPCPKC
301: KRPIEKNQGC MHMTCTPPCK FEFCWLCLGA WSDHGERTGG FYACNRYEAA KQEGVYDETE RRREMAKNSL ERYTHYYERW ASNQSSRQKA LADLHQMQTV
401: HIEKLSDTQC QPESQLKFIT EAWLQIVECR RVLKWTYSYG YYLPEHEHAK KQFFEYLQGE AESGLERLHQ CAEKELQLFL NADGPSKDFN DFRTKLAGLT
501: SVTRNYFENL VRALENGLVD VDSNGAASSK ATSSKNAAGS SKGRGGRGKA TIRTISSRMT DDNHWSCEHC TYANVKSATT CQMCNQQRR
001: MDSEEDMLDA HDMESGEDDF YSGGTDDCND SDDGEPDYGF VEEDADDSAM IASHRSQKNF CVLREEDIRR HQMDNIERVS VVLSITEVEA SILLRHFHWS
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
101: VGRVHDEWFA DEERVRKTVG ILESHVVPPS DDSELTCGIC FDSYPPEKIA SVSCGHPFCT TCWTGYISTT INDGPGCLML RCPDPSCLAA VGHDMVDKLA
201: SEDEKEKYNR YFLRSYIEDN RKMKWCPAPG CDFAIDFVAG SGNYDVSCLC SFSFCWNCTE EAHRPVDCST VSKWILKNSA ESENMNWILA NSKPCPRCKR
301: PIEKNQGCMH MTCTPPCKYE FCWLCLGAWM DHGERTGGFY ACNRYEVAKQ EGQYDETERR REMAKNSLER YTHYYERWAS NQTSRQKAMA DLQQAQMQNL
401: EKLSDKQCTP ESQLKFILEA WLQIIECRRV LKWTYAYGYY LPEHEHAKRQ FFEYLQGEAE SGLERLHQCV EKDLVQFLIA EGPSKDFNDF RTKLAGLTSV
501: TKNYFENLVK ALENGLADVD SHAACSSKST SSKSTGCSSK TRGKGKGSSR TGGSSRNPDD NL
Arabidopsis Description
ARI7Probable E3 ubiquitin-protein ligase ARI7 [Source:UniProtKB/Swiss-Prot;Acc:Q84RR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.