Factsheet for Bra015463.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47704	Canola	nucleus	99.64	99.64
Bra021726.1-P	Field mustard	nucleus	71.51	79.48
Bra022845.1-P	Field mustard	nucleus	77.6	78.3
AT1G05890.2	Thale cress	cytosol, endoplasmic reticulum, nucleus	80.29	75.42
Solyc06g073340.2.1	Tomato	nucleus	67.2	68.18
PGSC0003DMT400069483	Potato	nucleus	67.2	67.57
Os04t0492100-01	Rice	nucleus	56.81	67.16
VIT_05s0102g00160.t01	Wine grape	nucleus	70.43	66.95
KRH10154	Soybean	nucleus	70.61	66.89
KRH23186	Soybean	nucleus	70.61	66.89
Bra006112.1-P	Field mustard	nucleus	63.44	66.29
GSMUA_Achr6P28580_001	Banana	nucleus	66.49	66.25
KRH24651	Soybean	nucleus	69.18	65.87
Bra022479.1-P	Field mustard	nucleus	66.49	65.78
GSMUA_Achr8P28870_001	Banana	nucleus	69.18	65.76
EES11042	Sorghum	nucleus	69.18	65.53
GSMUA_Achr9P07970_001	Banana	nucleus	64.7	65.4
Zm00001d003207_P001	Maize	nucleus	69.0	65.36
KRH29654	Soybean	nucleus	68.64	65.36
Zm00001d025750_P011	Maize	extracellular	68.64	65.03
TraesCS6B01G245900.2	Wheat	nucleus	68.28	64.91
TraesCS6D01G198600.5	Wheat	nucleus	68.46	64.86
TraesCS6A01G216900.1	Wheat	nucleus	68.28	64.69
TraesCS2A01G349600.1	Wheat	nucleus	68.1	64.52
TraesCS2B01G368000.2	Wheat	nucleus	68.1	64.52
TraesCS2D01G348000.2	Wheat	nucleus	68.1	64.52
HORVU6Hr1G055260.4	Barley	nucleus	68.1	64.52
GSMUA_Achr3P16920_001	Banana	nucleus	67.2	63.88
Bra021742.1-P	Field mustard	nucleus	56.09	62.85
Bra023338.1-P	Field mustard	nucleus	61.83	62.5
Bra022865.1-P	Field mustard	nucleus	54.84	58.73
Bra005642.1-P	Field mustard	nucleus	52.87	57.84
HORVU2Hr1G085060.3	Barley	cytosol	63.62	53.06
Zm00001d046141_P001	Maize	cytosol	24.19	47.54
Bra015460.1-P	Field mustard	nucleus	36.74	39.42
Bra018221.1-P	Field mustard	cytosol	24.01	29.84
Bra039068.1-P	Field mustard	nucleus	25.09	26.72
Bra038658.1-P	Field mustard	nucleus	20.61	26.62
Bra001960.1-P	Field mustard	nucleus	27.24	26.12
Bra011524.1-P	Field mustard	nucleus	27.6	26.06
Bra028646.1-P	Field mustard	nucleus	22.04	25.89
Bra033024.1-P	Field mustard	nucleus	23.48	24.9
Bra038659.1-P	Field mustard	nucleus	22.04	24.55
Bra029204.1-P	Field mustard	nucleus	18.1	22.7
Bra038276.1-P	Field mustard	cytosol	24.01	22.22
Bra038660.1-P	Field mustard	cytosol	6.99	21.08
Bra009365.1-P	Field mustard	cytosol	23.66	19.73

Protein Annotations

Gene3D:1.20.120.1750	MapMan:19.2.2.1.5.4.1	Gene3D:3.30.40.10	EnsemblPlantsGene:Bra015463	EnsemblPlants:Bra015463.1	EnsemblPlants:Bra015463.1-P
ncoils:Coil	InterPro:E3_UB_ligase_RBR	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	GO:GO:0046872	InterPro:IBR_dom	InterPro:IPR001841	InterPro:IPR013083	UniProt:M4DG40
PFAM:PF01485	PFscan:PS50089	PANTHER:PTHR11685	PANTHER:PTHR11685:SF177	SMART:SM00647	SUPFAM:SSF57850
UniParc:UPI0002545319	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

AT1G05890 (E=4e-251) | zinc finger protein-related

Coordinates

chrA10:-:1611579..1616087

Molecular Weight (calculated)

63212.7 Da

IEP (calculated)

4.882

GRAVY (calculated)

-0.655

Length

558 amino acids

Sequence
(BLAST)

001: MDSEDDLLGT HDMESGEDDF YSGGGSDDDY IESDGDEPDY GFVEEDVDDS LMIASHRSQI NYVVLKEEDI RKLQMDDIGR VSMVLSISEA EASILLLHYH
101: WSVSKVHDEW FADEEGVRKA VGILERPVVS APHGGELTCG ICFEPFQREE VVSLACGHPF CSTCWTGYIS TTINDGPGCL MLKCPEPSCP AAVGQDMFEK
201: FASKEDKEKY YKYFLRSYIE DNRKMKWCPA PGCENAIEFA AGTSNYDVSC LCSRSFCWNC TEEAHRPVDC HTVAQWIRKN SAESENMNWI LANSKPCPKC
301: KRPIEKNHGC MHMTCTPPCK YEFCWLCLNA WTAHGERTGG FYACNRYESA KQEGLYDEAE KRREMAKNSL ERYTHYYERW ASNQTSRQKA VEDLQKAQLE
401: KLEKLSDIQC TPESQLKFIS EAWLQIIECR RVLKWTYAYG YYLPDHDKKQ FFEYLQGEAE SGLERLHKCV EKELEVFLVA EGPSDDFNHF RTKLTGLTSI
501: TKTYFENLVK ALENGLADVD TQGTSSKSTS SKSSKTKGSG KGKGSSRNGG SSKSSDGN

Best Arabidopsis Sequence Match ( AT1G05890.1 )
(BLAST)

001: MDSDDDMHDM DSVDYDYYSG GTYDDNDSDE TDFGFGEADT DDAAIIASYR SKSNYVVLKE EDIRRHQNDD VGRVSAVLSI TDVEASTLLL HYHWSVSKVN
101: DEWFADEERV RRTVGILEGP VVTTPDGREF TCGICFDSYT LEEIVSVSCG HPFCATCWTG YISTTINDGP GCLMLKCPDP SCPAAIGRDM IDKLASKEDK
201: EKYYRYFLRS YVEVNREMKW CPAPGCEHAI DFAGGTESYD VSCLCSHSFC WNCTEEAHRP VDCDTVGKWI LKNSAESENM NWILANSKPC PKCKRPIEKN
301: HGCMHMTCTP PCKFEFCWLC LNAWTEHGER TGGFYACNRY EAAKQEGLYD EAERRREMAK NSLERYTHYY ERWASNQVSR QKAMGDLQKM QSEKLGKLSD
401: IQCTPESQLK FIAEAWLQII ECRRVLKWTY AYGYYLQDHA KKPFFEYLQG EAESGLERLH KCVEKDIEVF ELAEGPSEEF NHFRTKLTGL TSITKTFFEN
501: LVKALENGLA DVDSQAASSK PANSKPSSKT KGGGKGKGSS KNGGSSRNPD GN

Arabidopsis Description

ARI5RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.