Factsheet for Bra011524.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75425	Canola	nucleus	99.83	99.83
AT4G34370.1	Thale cress	nucleus	85.11	84.25
Bra001960.1-P	Field mustard	nucleus	72.76	73.88
VIT_03s0063g02000.t01	Wine grape	nucleus	67.01	67.23
KRH24517	Soybean	nucleus	64.97	66.21
KRH29521	Soybean	nucleus	64.47	65.69
Solyc01g109280.2.1	Tomato	nucleus	63.96	64.07
PGSC0003DMT400064832	Potato	nucleus	63.79	63.9
Bra033024.1-P	Field mustard	nucleus	54.48	61.22
Bra039068.1-P	Field mustard	nucleus	53.81	60.69
VIT_18s0001g11740.t01	Wine grape	cytosol	55.67	59.28
EER92613	Sorghum	nucleus	59.05	57.78
Solyc04g079780.2.1	Tomato	cytosol	50.08	56.7
TraesCS4A01G061500.1	Wheat	nucleus	59.39	56.61
TraesCS4B01G236900.1	Wheat	nucleus	59.22	56.45
Os03t0233500-01	Rice	nucleus	58.38	56.37
TraesCS4D01G238400.2	Wheat	nucleus	59.05	56.29
HORVU4Hr1G066180.1	Barley	nucleus	59.05	56.29
PGSC0003DMT400043486	Potato	cytosol	49.58	56.24
GSMUA_Achr6P23120_001	Banana	nucleus	61.08	56.14
HORVU1Hr1G018020.1	Barley	cytosol	17.26	55.43
Zm00001d028285_P003	Maize	nucleus	57.87	55.16
PGSC0003DMT400039948	Potato	nucleus	49.58	53.96
Solyc12g089000.1.1	Tomato	nucleus	48.22	53.07
HORVU7Hr1G068450.2	Barley	nucleus	22.17	51.17
GSMUA_Achr5P01850_001	Banana	nucleus	44.67	48.98
Zm00001d048017_P003	Maize	nucleus	57.87	44.71
TraesCS4A01G243200.1	Wheat	nucleus	40.78	43.98
TraesCS4B01G071800.1	Wheat	nucleus	40.78	43.9
TraesCS4D01G070600.1	Wheat	nucleus	39.76	43.68
EER93790	Sorghum	nucleus	39.59	43.17
TraesCS4D01G070400.1	Wheat	nucleus	38.92	43.07
Zm00001d013716_P002	Maize	nucleus	38.75	42.88
Os03t0625800-01	Rice	cytosol	38.92	42.59
Os03t0625933-00	Rice	nucleus	23.52	42.25
TraesCS4B01G071700.1	Wheat	nucleus	38.41	41.96
EER93787	Sorghum	nucleus	36.89	40.75
TraesCS4D01G069600.1	Wheat	nucleus	36.21	40.07
TraesCS4A01G244200.1	Wheat	nucleus	35.87	39.55
TraesCS4B01G070800.1	Wheat	nucleus	35.36	38.99
HORVU4Hr1G011910.1	Barley	cytosol, plastid	40.1	38.73
HORVU4Hr1G011770.1	Barley	nucleus	34.86	38.36
Os03t0626100-01	Rice	nucleus	35.53	36.84
Bra021726.1-P	Field mustard	nucleus	23.69	27.89
Bra022845.1-P	Field mustard	nucleus	26.06	27.85
Bra015463.1-P	Field mustard	nucleus	26.06	27.6
Bra021742.1-P	Field mustard	nucleus	22.5	26.71
Bra022479.1-P	Field mustard	nucleus	25.21	26.42
Bra022865.1-P	Field mustard	nucleus	23.18	26.3
Bra005642.1-P	Field mustard	nucleus	22.67	26.27
Bra006112.1-P	Field mustard	nucleus	23.69	26.22
Bra023338.1-P	Field mustard	nucleus	23.86	25.54
Bra015460.1-P	Field mustard	nucleus	18.44	20.96
Bra018221.1-P	Field mustard	cytosol	14.89	19.6
Bra028646.1-P	Field mustard	nucleus	14.89	18.53
Bra038659.1-P	Field mustard	nucleus	15.57	18.36
Bra038658.1-P	Field mustard	nucleus	13.2	18.06
Bra029204.1-P	Field mustard	nucleus	12.01	15.96
Bra038276.1-P	Field mustard	cytosol	15.4	15.09
Bra009365.1-P	Field mustard	cytosol	16.41	14.5
Bra038660.1-P	Field mustard	cytosol	3.55	11.35

Protein Annotations

Gene3D:1.20.120.1750	MapMan:19.2.2.1.5.4.1	Gene3D:3.30.40.10	EnsemblPlantsGene:Bra011524	EnsemblPlants:Bra011524.1	EnsemblPlants:Bra011524.1-P
ncoils:Coil	InterPro:E3_UB_ligase_RBR	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	GO:GO:0046872	InterPro:IBR_dom	InterPro:IPR001841	InterPro:IPR013083	UniProt:M4D4W7
PFAM:PF01485	PFscan:PS50089	PANTHER:PTHR11685	PANTHER:PTHR11685:SF150	SMART:SM00647	SUPFAM:SSF57850
UniParc:UPI000254570F	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

AT4G34370 (E=4e-305) ATARI1, ARI1 | ARI1 (ARIADNE); protein binding / zinc ion binding

Coordinates

chrA01:-:1828883..1831640

Molecular Weight (calculated)

67687.5 Da

IEP (calculated)

5.525

GRAVY (calculated)

-0.627

Length

591 amino acids

Sequence
(BLAST)

001: MDDYYTADEE DCYYSSDHDE SLGGIDNDDS EFHAASSKKS TTQVITQESL LAAQREDLLR VMELLSIKEH HARTLLIHYQ WDIEKLISVF VEKGKDSLFS
101: GAGVTVFDSS SLPSSSPNMS CDVCLEDVVA EQMKRMDCGH CFCNDCWTEH FTVQINEGQS KRIRCMAHKC NAICDEDVVR SLVSKKRPDL AEKFDRFLVE
201: SYIEDNKMVK WCPSTPHCGN AIRAEDDKLC EVECSCGLQF CFSCMCQAHS PCSCLMWELW RKKCRDESET VNWITVHTKL CPKCYKPVEK NGGCNLVRCI
301: CGQYFCWLCG GATGKEHTYR SIAGHSCGRY EDDKERQMER AKRDLDRYTH YHHRYKAHTD SSKLEDKLRN TILEKVSNSE KKELKLKDFT WVTNGLNRLF
401: RSRRILSYSY AFAYYMFGEE LFKDEMSSSE REMKKNLFED QQQQLEGNVE KLSQLLEEPF DDFSDDKVMD VRIHVINLSV AVDSLCKKMY ECIENDLLGS
501: LQSGIHNIAP YSSKGIEQAA EFHASWSSSK ALDSSGTSGE TSRPEKASGS RDSEDMVCSS SKKRPRREGS FTNSKVTLLD LNLPADFMDQ N

Best Arabidopsis Sequence Match ( AT4G34370.1 )
(BLAST)

001: MDDYFSAEEE ACYYSSDQDS LDGIDNEESE LQPLSSKRSN TQVITQESLL AAQREDLLRV MELLSIKEHH ARTLLIHYQW DVEKLFAVFV EKGKDSLFSG
101: AGVTVFDYQY GNSSFPQSSQ MSCDVCMEDL PGDHMTRMDC GHCFCNNCWT EHFTVQINEG QSKRIRCMAH QCNAICDEDI VRSLVSKKRP DLAAKFDRYL
201: LESYIEDNRM VKWCPSTPHC GNAIRAEDDK LCEVECSCGL QFCFSCLCQA HSPCSCLMWE LWRKKCRDES ETINWITVHT KLCPKCYKPV EKNGGCNLVR
301: CICGQCFCWL CGGATGSDHT YRSIAGHSCG RYQDDKEKQM ERAKRDLNRY THYHHRYKAH TDSSKLEDKL RDTIHEKVSK SEKRELKLKD FSWVTNGLDR
401: LFRSRRVLSY SYAFAYYMFG EEMFKDEMTP EEREIKKNLF EDQQQQLESN VEKLSQFLEE PFDEFSNDKV MAIRIQIINL SVAVDTLCKK MYECIENDLL
501: GSLQLGIHNI SPYRSKGIEQ AAQFYASWNS KDADKFQPLD SGTSGVTSRP EQASGSRSSE DTICSSSQKR PKKEGSFLNN KVTLLDLNLP ADFVDQN

Arabidopsis Description

ARI1Probable E3 ubiquitin-protein ligase ARI1 [Source:UniProtKB/Swiss-Prot;Acc:Q949V6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.