Factsheet for Bra038659.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84439	Canola	nucleus	93.61	71.49
Bra038660.1-P	Field mustard	cytosol	23.15	62.7
Bra029204.1-P	Field mustard	nucleus	51.3	57.75
Bra038658.1-P	Field mustard	nucleus	45.51	52.78
AT5G63750.1	Thale cress	nucleus	53.89	50.37
AT5G63760.2	Thale cress	nucleus	44.91	49.78
AT5G63730.1	Thale cress	cytosol	49.9	49.41
Bra018221.1-P	Field mustard	cytosol	34.13	38.08
Bra028646.1-P	Field mustard	nucleus	33.73	35.58
Bra038276.1-P	Field mustard	cytosol	34.33	28.52
Bra009365.1-P	Field mustard	cytosol	33.73	25.26
Bra021726.1-P	Field mustard	nucleus	24.35	24.3
Bra021742.1-P	Field mustard	nucleus	23.95	24.1
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	24.55	24.02
Bra005642.1-P	Field mustard	nucleus	24.35	23.92
Bra022865.1-P	Field mustard	nucleus	24.55	23.61
Bra006112.1-P	Field mustard	nucleus	24.35	22.85
Bra023338.1-P	Field mustard	nucleus	25.15	22.83
Bra022479.1-P	Field mustard	nucleus	25.55	22.7
Bra022845.1-P	Field mustard	nucleus	24.75	22.42
Bra015460.1-P	Field mustard	nucleus	22.95	22.12
Bra015463.1-P	Field mustard	nucleus	24.55	22.04
KRH24184	Soybean	nucleus	22.16	21.26
Bra039068.1-P	Field mustard	nucleus	17.96	17.18
Bra033024.1-P	Field mustard	nucleus	17.76	16.92
Bra001960.1-P	Field mustard	nucleus	18.76	16.15
Bra011524.1-P	Field mustard	nucleus	18.36	15.57

Protein Annotations

Gene3D:1.20.120.1750	MapMan:19.2.2.1.5.4.1	EnsemblPlantsGene:Bra038659	EnsemblPlants:Bra038659.1	EnsemblPlants:Bra038659.1-P	InterPro:E3_UB_ligase_RBR
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0046872
InterPro:IBR_dom	InterPro:IPR001876	UniProt:M4FC43	PFAM:PF01485	ScanProsite:PS01358	PANTHER:PTHR11685
PANTHER:PTHR11685:SF213	SMART:SM00647	SUPFAM:SSF57850	UniParc:UPI000253F2C7	InterPro:Znf_RanBP2	SEG:seg

Description

AT5G63750 (E=2e-136) | IBR domain-containing protein

Coordinates

chrA06:-:14438696..14440297

Molecular Weight (calculated)

57322.9 Da

IEP (calculated)

4.480

GRAVY (calculated)

-0.438

Length

501 amino acids

Sequence
(BLAST)

001: MEDDDLQRPY SVCTRDDLKE RITKQIDVIS EIFCVSNSDA TVLLMKLRWN SQLLSERLSQ ENKKLLTESG LKPVDVTDSN QDLSDSSCDE FYEFFDDVDD
101: DGDDVVKVST PFCSHKFSTT YWSKYLDKNF FSVEKTLDTI SCPHHDCGAS VGRDTIEKLT VKDRDSYDEY VLRSYLEKSK KQIKQCPGCS YFIEFHKGTD
201: AEEYGLNVVC LCGHNFCCRC SLETHRPVTC NNASDWLSRD LQKLSEASDK SLSFLWIEDN TETCPHCLSP LEIGLGSLDS KFVPCGYCSG SFCWECMHSE
301: ESHKTESGTY GDCLEPVEQD PLWNVEVVDT SCLDRWEACE VSLVEARSEL QAFKESDNTS EEYIRIVRDG LMLIVQCRQF LKWTCVYEHI HLEYEASKKE
401: FLRFLQDYAN TLVERYAETL KEDTKALSAA QLVCNVPAVT SSIGNYFYNF SKALKDGLDA VKVKHYDDFA PCWLCDRCSS ANTWLHKACQ MCCESPVVEA
501: K

Best Arabidopsis Sequence Match ( AT5G63750.1 )
(BLAST)

001: MENNREGPYS VLTRDQLKGN MKKQIAEISE IFSLSKPDAT VLLMFLRWDS HEVSEFLVEN NEKVLSESGL KPVVVDPNQD LYKISSCGIC FKTCDDGDYL
101: ISTPFCSHMF CKSCWRKYLE KNFYLVEKTQ TRISCPHGAC QAAVGPDTIQ KLTVCDQEMY VEYILRSYIE GNKVLEIKYC PAQDCNYVIE FHQKNHDGAD
201: QEDYGFNVVC LCGHIFCWRC MLESHKPVTC NNASDWLFRD LNSLSKESGE KPLSLSSFET REKTYPLSSI KATKKVCPHC LRPADLGTKQ YLRFLTCACN
301: GRFCWKCMQP EEAHKTESGF YKFCNVSMTF EGRAPKTLEG RAEPENSCVG LWKASEVSLK QAKSDLQAFE ESNIKNPSDL TEKDFTIIRK GLMLIVQCRQ
401: VLKWSCVYDY LHAEYEMSKR EYLRFLQADA TSLVESFSKT LNEEIGRASS ATYENFCCVK HKVTIETSNI GNYFYHFIKT LQEGLDDVKV KSYDDYGGLF
501: WLCDRCTYGN TWFHKECLMC SDDIAARVDL SDMSLN

Arabidopsis Description

ARI13Probable E3 ubiquitin-protein ligase ARI13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFN9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.