Skip to main content
crop-pal logo
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT5G63750.1 Thale cress nucleus 57.96 48.88
CDY41533 Canola nucleus 54.87 46.7
Bra038658.1-P Field mustard nucleus 44.47 46.53
CDY41534 Canola nucleus 18.81 45.95
Bra038660.1-P Field mustard cytosol 18.58 45.41
Bra038659.1-P Field mustard nucleus 49.78 44.91
AT5G63730.1 Thale cress cytosol 50.0 44.66
CDX84438 Canola cytosol 35.84 44.02
CDY39850 Canola nucleus 42.92 43.5
Bra029204.1-P Field mustard nucleus 42.48 43.15
CDY31353 Canola nucleus 42.48 43.15
AT5G08730.1 Thale cress cytosol 40.27 36.4
CDX84439 Canola nucleus 50.88 35.06
AT1G65430.1 Thale cress nucleus 26.99 21.52
AT2G31760.1 Thale cress nucleus 24.11 21.21
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 23.67 20.9
AT2G31780.1 Thale cress nucleus 19.91 20.32
AT2G31510.1 Thale cress nucleus 25.22 20.28
AT2G31770.1 Thale cress nucleus 24.34 20.26
KRH24184 Soybean nucleus 22.35 19.35
AT1G05890.2 Thale cress cytosol, endoplasmic reticulum, nucleus 24.34 18.52
AT1G05880.2 Thale cress cytosol 18.81 17.14
AT3G27710.1 Thale cress nucleus 17.92 15.08
AT2G16090.1 Thale cress nucleus 18.81 14.33
AT4G34370.1 Thale cress nucleus 18.81 14.24
AT3G27720.1 Thale cress nucleus 14.38 13.18
Protein Annotations
Gene3D:1.20.120.1750MapMan:19.2.2.1.5.4.1Gene3D:3.30.40.10EntrezGene:836496ProteinID:AED97793.1ProteinID:AED97794.1
ProteinID:ANM70851.1Symbol:ARI15ArrayExpress:AT5G63760EnsemblPlantsGene:AT5G63760RefSeq:AT5G63760TAIR:AT5G63760
RefSeq:AT5G63760-TAIR-GEnsemblPlants:AT5G63760.2TAIR:AT5G63760.2ProteinID:BAB10469.1EMBL:BT022004EMBL:BT029215
ProteinID:CAD52897.1InterPro:E3_UB_ligase_RBRGO:GO:0000151GO:GO:0000209GO:GO:0003674GO:GO:0003824
GO:GO:0004842GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987
GO:GO:0016567GO:GO:0016740GO:GO:0019538GO:GO:0031624GO:GO:0032436GO:GO:0042787
GO:GO:0046872GO:GO:0061630InterPro:IBR_domInterPro:IPR001841InterPro:IPR001876InterPro:IPR013083
RefSeq:NP_001332429.1RefSeq:NP_201181.2RefSeq:NP_974987.1PFAM:PF01485PO:PO:0000013PO:PO:0000037
PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025281ScanProsite:PS01358PFscan:PS50089PANTHER:PTHR11685
PANTHER:PTHR11685:SF213UniProt:Q84RQ8SMART:SM00647SUPFAM:SSF57850UniParc:UPI000005E835InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHDInterPro:Znf_RanBP2SEG:seg:::
Description
ARI15Probable E3 ubiquitin-protein ligase ARI15 [Source:UniProtKB/Swiss-Prot;Acc:Q84RQ8]
Coordinates
chr5:-:25515662..25517875
Molecular Weight (calculated)
51769.5 Da
IEP (calculated)
5.797
GRAVY (calculated)
-0.368
Length
452 amino acids
Sequence
(BLAST)
001: MEKLMTESGL KPVVIDSNQD LSRVYCGICS NIGDDDYDGD AVVVDGDLIS TPFCSHKFCK ACWSKYLKKN FFSVEKNHTA ISCPDRDCRA AVGPETVEKL
101: TVRDQAMYEL YILKSYREKY LGWKLKLCPA RGCNYVIEFH LASEDEEHSL NIVCLCGHIF CWRCMLESHR PVTCNNASDW LSRDLEKLIE EVDKPSTVSW
201: IDANTKPCPH CFIPVEIDGE RPWAQFLTCV CSGRFCWKCF RSPETHGTSG SCLAPARSSN VGFNHWNRAK PGISCLDLWN ASQVNLVNAK YELEAFEESI
301: IKKPSDLKEQ DVKVLREGLM LIVQCRQFLK WSCAYDYIHT EYDMAKREYL RFLQQNASGI VHSFSQSIKE ETEAKELTCG KLLSETTNIG NFFYHFIKTL
401: REGLPEVQAE SYDNYGGPYW LCDRCTYGNS WFQRACKMCC DPTASKMDEL SD
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.